RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 VWA5AO00534 786 aa16■□□□□ 0.15
VRK3-217ENST00000599538 DHX15O43143 795 aaKnown RBP16■□□□□ 0.15
VRK3-217ENST00000599538 RRP9O43818 475 aaKnown RBP16■□□□□ 0.15
VRK3-217ENST00000599538 HOXA7P31268 230 aaPredicted RBP16■□□□□ 0.15
VRK3-217ENST00000599538 HMGCS2P54868 508 aa16■□□□□ 0.15
VRK3-217ENST00000599538 HERVK_113P62684 666 aa16■□□□□ 0.15
VRK3-217ENST00000599538 APBA1Q02410 837 aa16■□□□□ 0.15
VRK3-217ENST00000599538 ITGB3BPQ13352 177 aaPredicted RBP16■□□□□ 0.15
VRK3-217ENST00000599538 ADAM9Q13443 819 aa16■□□□□ 0.15
VRK3-217ENST00000599538 PRKG1Q13976 671 aa16■□□□□ 0.15
VRK3-217ENST00000599538 ERCC6LQ2NKX8 1250 aa16■□□□□ 0.15
VRK3-217ENST00000599538 FIGNQ5HY92 759 aa16■□□□□ 0.15
VRK3-217ENST00000599538 TEKT3Q9BXF9 490 aa16■□□□□ 0.15
VRK3-217ENST00000599538 GPRC5DQ9NZD1 345 aa16■□□□□ 0.15
VRK3-217ENST00000599538 ZHX2Q9Y6X8 837 aa16■□□□□ 0.15
VRK3-217ENST00000599538 PARP14Q460N5 1801 aa16■□□□□ 0.15
VRK3-217ENST00000599538 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 SETQ01105 290 aaPredicted RBP15.99■□□□□ 0.15
VRK3-217ENST00000599538 GHRHRQ02643 423 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 ZNF569Q5MCW4 686 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 DCAF15Q66K64 600 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 TRIM59Q8IWR1 403 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 ZC3H3Q8IXZ2 948 aaKnown RBP15.99■□□□□ 0.15
VRK3-217ENST00000599538 ZNF280CQ8ND82 737 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 CEP63Q96MT8 703 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 CARD6Q9BX69 1037 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 GINM1Q9NU53 330 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 RLFQ13129 1914 aa15.99■□□□□ 0.15
VRK3-217ENST00000599538 SSC5DA1L4H1 1573 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 A0A1W2PQJ5 194 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 NR2F2P24468 414 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 NMT1P30419 496 aaKnown RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 EPHA7Q15375 998 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 KNOP1Q1ED39 458 aaKnown RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 TKFCQ3LXA3 575 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 ARHGAP29Q52LW3 1261 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 KSR1Q8IVT5 923 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 TRERF1Q96PN7 1200 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 LXNQ9BS40 222 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 CRACR2AQ9BSW2 395 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 NHEJ1Q9H9Q4 299 aaPredicted RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 UBIAD1Q9Y5Z9 338 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 COL11A1P12107 1806 aaPredicted RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 RCCD1A6NED2 376 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 TBCAO75347 108 aaKnown RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 GCNT3O95395 438 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 TFRCP02786 760 aaKnown RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 TSR1Q2NL82 804 aaKnown RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 ZC2HC1CQ53FD0 456 aaPredicted RBP15.98■□□□□ 0.15
VRK3-217ENST00000599538 NSMFQ6X4W1 530 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 SLC35F6Q8N357 371 aa15.98■□□□□ 0.15
VRK3-217ENST00000599538 BCRP11274 1271 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 MARSP56192 900 aaKnown RBP15.97■□□□□ 0.15
VRK3-217ENST00000599538 CYP27A1Q02318 531 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 PGM5Q15124 567 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 EDRF1Q3B7T1 1238 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 PCNX4Q63HM2 1172 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 PDCL2Q8N4E4 241 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 BAP1Q92560 729 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 FIZ1Q96SL8 496 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 RIT2Q99578 217 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 SH2D3AQ9BRG2 576 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 PDCL3Q9H2J4 239 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 AGO4Q9HCK5 861 aaKnown RBP15.97■□□□□ 0.15
VRK3-217ENST00000599538 PICK1Q9NRD5 415 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 TRAF3IP3Q9Y228 551 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 MRFAP1Q9Y605 127 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 ASTN1O14525 1302 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 PHIPQ8WWQ0 1821 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 LRRC53A6NM62 1247 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 ZNF263O14978 683 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 CLIC2O15247 247 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 KIF5CO60282 957 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 ATP9AO75110 1047 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 ZBED4O75132 1171 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 NOL4O94818 638 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 MYCLP12524 364 aaPredicted RBP15.97■□□□□ 0.15
VRK3-217ENST00000599538 CASP4P49662 377 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 USP14P54578 494 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 KRT26Q7Z3Y9 468 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 APOBEC3FQ8IUX4 373 aaKnown RBP15.97■□□□□ 0.15
VRK3-217ENST00000599538 MYCT1Q8N699 235 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 REPS2Q8NFH8 660 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 ARHGAP20Q9P2F6 1191 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 GUCA1BQ9UMX6 200 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 PLAGL2Q9UPG8 496 aa15.97■□□□□ 0.15
VRK3-217ENST00000599538 TGFB1I1O43294 461 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 KIF20AO95235 890 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 RNF207Q6ZRF8 634 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 RRAGAQ7L523 313 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 NACC1Q96RE7 527 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 RMDN3Q96TC7 470 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 LACRTQ9GZZ8 138 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 JADE2Q9NQC1 790 aa15.96■□□□□ 0.15
VRK3-217ENST00000599538 CTDP1Q9Y5B0 961 aaPredicted RBP15.96■□□□□ 0.15
VRK3-217ENST00000599538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.96■□□□□ 0.15
VRK3-217ENST00000599538 FRMPD4Q14CM0 1322 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms