RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 LMBR1Q8WVP7 490 aa15.68■□□□□ 0.1
UPF1-205ENST00000598209 SLC5A5Q92911 643 aa15.68■□□□□ 0.1
UPF1-205ENST00000598209 WNT8BQ93098 351 aa15.68■□□□□ 0.1
UPF1-205ENST00000598209 GJA10Q969M2 543 aa15.68■□□□□ 0.1
UPF1-205ENST00000598209 RIT2Q99578 217 aa15.68■□□□□ 0.1
UPF1-205ENST00000598209 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.68■□□□□ 0.11e-6■■□□□ 13.6
UPF1-205ENST00000598209 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
UPF1-205ENST00000598209 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
UPF1-205ENST00000598209 SLC37A4O43826 429 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 CCNT1O60563 726 aaKnown RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 GAS7O60861 476 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 IQCF3P0C7M6 154 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 CKBP12277 381 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 RBL2Q08999 1139 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 PPFIA1Q13136 1202 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 SAFBQ15424 915 aaKnown RBP eCLIP15.67■□□□□ 0.1
UPF1-205ENST00000598209 TRIM71Q2Q1W2 868 aaKnown RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 TMEM240Q5SV17 173 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 FAM160B1Q5W0V3 765 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 PPP4R3AQ6IN85 833 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 PSRC1Q6PGN9 363 aaPredicted RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 SERINC5Q86VE9 423 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 CCDC60Q8IWA6 550 aaPredicted RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 SMAP1Q8IYB5 467 aaPredicted RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 ETNPPLQ8TBG4 499 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 RNPC3Q96LT9 517 aaKnown RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 NAP1L4Q99733 375 aaKnown RBP15.67■□□□□ 0.1
UPF1-205ENST00000598209 EVPLQ92817 2033 aa15.67■□□□□ 0.1
UPF1-205ENST00000598209 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
UPF1-205ENST00000598209 PSMD10O75832 226 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 PSAPP07602 524 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 SELPP16109 830 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 RFC2P35250 354 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 ADAM17P78536 824 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 PLCB4Q15147 1175 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 GRIK4Q16099 956 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 SWSAP1Q6NVH7 229 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 PDXDC2PQ6P474 469 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 LRRC8DQ7L1W4 858 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 DEFB128Q7Z7B8 93 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 FBXO18Q8NFZ0 1043 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 UNC45AQ9H3U1 944 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 ZNF302Q9NR11 478 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 TRPC6Q9Y210 931 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 SAMM50Q9Y512 469 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 PCDHA10Q9Y5I2 948 aa15.66■□□□□ 0.1
UPF1-205ENST00000598209 WDR64B1ANS9 1081 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 CHMP2AO43633 222 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 FGBP02675 491 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 INSRRP14616 1297 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 THPOP40225 353 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 SLC26A2P50443 739 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 ZNF618Q5T7W0 954 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 TNPO1Q92973 898 aaKnown RBP15.65■□□□□ 0.1
UPF1-205ENST00000598209 VWCEQ96DN2 955 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 KCNMB3Q9NPA1 279 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 DISC1Q9NRI5 854 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 KIF3AQ9Y496 699 aa15.65■□□□□ 0.1
UPF1-205ENST00000598209 LOXHD1Q8IVV2 1947 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 POTEB3A0JP26 581 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 RRN3P2A6NIE6 340 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 PFKMP08237 780 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 SFNP31947 248 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 JAK3P52333 1124 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 IGBP1P78318 339 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 POTEBQ6S5H4 581 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 POTEDQ86YR6 584 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 LRCH3Q96II8 777 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 FAM20AQ96MK3 541 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 FOXP1Q9H334 677 aaPredicted RBP15.64■□□□□ 0.09
UPF1-205ENST00000598209 GABBR1Q9UBS5 961 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 TUBE1Q9UJT0 475 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 MAFBQ9Y5Q3 323 aaPredicted RBP15.64■□□□□ 0.09
UPF1-205ENST00000598209 SIP14410 1827 aa15.64■□□□□ 0.09
UPF1-205ENST00000598209 GBF1Q92538 1859 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 MBLAC1A4D2B0 266 aaPredicted RBP15.63■□□□□ 0.09
UPF1-205ENST00000598209 TBX3O15119 743 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 HBP1O60381 514 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 PARNO95453 639 aaKnown RBP15.63■□□□□ 0.09
UPF1-205ENST00000598209 ATP4AP20648 1035 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 MARCH8Q5T0T0 291 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 TRAF7Q6Q0C0 670 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 B3GNT9Q6UX72 402 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 RUFY4Q6ZNE9 571 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 OTOP2Q7RTS6 562 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 MIER3Q7Z3K6 550 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 RDM1Q8NG50 284 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 ATP8B4Q8TF62 1192 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 TRAPPC12Q8WVT3 735 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 HERVK_113Q902F9 699 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 FTOQ9C0B1 505 aaKnown RBP eCLIP15.63■□□□□ 0.09
UPF1-205ENST00000598209 IGSF9BQ9UPX0 1349 aa15.63■□□□□ 0.09
UPF1-205ENST00000598209 RSPH10B2B2RC85 870 aa15.62■□□□□ 0.09
UPF1-205ENST00000598209 WNT7AO00755 349 aa15.62■□□□□ 0.09
UPF1-205ENST00000598209 MARCH6O60337 910 aa15.62■□□□□ 0.09
UPF1-205ENST00000598209 NBNO60934 754 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms