RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 FGBP02675 491 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 SELPP16109 830 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 RFC2P35250 354 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 FOSBP53539 338 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 KRT76Q01546 638 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 LETM2Q2VYF4 491 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 MIS18BP1Q6P0N0 1132 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 SMAP1Q8IYB5 467 aaPredicted RBP18.94■□□□□ 0.62
SSBP4-204ENST00000597724 DIS3L2Q8IYB7 885 aaKnown RBP18.94■□□□□ 0.62
SSBP4-204ENST00000597724 LMBR1Q8WVP7 490 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 LRCH3Q96II8 777 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 RNPC3Q96LT9 517 aaKnown RBP18.94■□□□□ 0.62
SSBP4-204ENST00000597724 KAT6AQ92794 2004 aa18.94■□□□□ 0.62
SSBP4-204ENST00000597724 SCN5AQ14524 2016 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 TANC1Q9C0D5 1861 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 FAM205CA6NFA0 338 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 PSMD10O75832 226 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 MCM2P49736 904 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 SLC26A2P50443 739 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 PPFIA1Q13136 1202 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 PLCB4Q15147 1175 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 RASIP1Q5U651 963 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 FAM160B1Q5W0V3 765 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 LRRC8DQ7L1W4 858 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 CCDC60Q8IWA6 550 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-204ENST00000597724 ETNPPLQ8TBG4 499 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 TMX3Q96JJ7 454 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 DDX25Q9UHL0 483 aaKnown RBP18.93■□□□□ 0.62
SSBP4-204ENST00000597724 TCEAL9Q9UHQ7 104 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 PCDHA10Q9Y5I2 948 aa18.93■□□□□ 0.62
SSBP4-204ENST00000597724 BACH1O14867 736 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 GAS7O60861 476 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 PFKMP08237 780 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 INSRRP14616 1297 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 GCFC2P16383 781 aaKnown RBP18.92■□□□□ 0.62
SSBP4-204ENST00000597724 GPNMBQ14956 572 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 GRIK4Q16099 956 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 ZNF618Q5T7W0 954 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 LRCH2Q5VUJ6 765 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 SWSAP1Q6NVH7 229 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 TRAF7Q6Q0C0 670 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 DEFB128Q7Z7B8 93 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 HERVK_113Q902F9 699 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 TNPO1Q92973 898 aaKnown RBP18.92■□□□□ 0.62
SSBP4-204ENST00000597724 GJA10Q969M2 543 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 C8orf76Q96K31 380 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 NAP1L4Q99733 375 aaKnown RBP18.92■□□□□ 0.62
SSBP4-204ENST00000597724 TEKT3Q9BXF9 490 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 ZNF302Q9NR11 478 aa18.92■□□□□ 0.62
SSBP4-204ENST00000597724 RRN3P2A6NIE6 340 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 WDR64B1ANS9 1081 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 SLC37A4O43826 429 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 CCNT1O60563 726 aaKnown RBP18.91■□□□□ 0.62
SSBP4-204ENST00000597724 PARNO95453 639 aaKnown RBP18.91■□□□□ 0.62
SSBP4-204ENST00000597724 PSAPP07602 524 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 THPOP40225 353 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 GUCY1B3Q02153 619 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 MARCH8Q5T0T0 291 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 FAM184AQ8NB25 1140 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 FBXO18Q8NFZ0 1043 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 TRPC6Q9Y210 931 aa18.91■□□□□ 0.62
SSBP4-204ENST00000597724 MAFBQ9Y5Q3 323 aaPredicted RBP18.91■□□□□ 0.62
SSBP4-204ENST00000597724 POTEB3A0JP26 581 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 MBLAC1A4D2B0 266 aaPredicted RBP18.9■□□□□ 0.62
SSBP4-204ENST00000597724 SFNP31947 248 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 SAFBQ15424 915 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSBP4-204ENST00000597724 GPR153Q6NV75 609 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 POTEBQ6S5H4 581 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 B3GNT9Q6UX72 402 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 OTOP2Q7RTS6 562 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 TET1Q8NFU7 2136 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 FAM20AQ96MK3 541 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 UNC45AQ9H3U1 944 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 KCNMB3Q9NPA1 279 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 DISC1Q9NRI5 854 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 TUBE1Q9UJT0 475 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 SAMM50Q9Y512 469 aa18.9■□□□□ 0.62
SSBP4-204ENST00000597724 CAND2O75155 1236 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 ATP4AP20648 1035 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 JAK3P52333 1124 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 IGBP1P78318 339 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 SMAD3P84022 425 aaKnown RBP18.89■□□□□ 0.61
SSBP4-204ENST00000597724 MBTPS1Q14703 1052 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 TAF2Q6P1X5 1199 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 RUFY4Q6ZNE9 571 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 ATP8B4Q8TF62 1192 aa18.89■□□□□ 0.61
SSBP4-204ENST00000597724 FTOQ9C0B1 505 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSBP4-204ENST00000597724 CXXC1Q9P0U4 656 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-204ENST00000597724 MYH9P35579 1960 aaKnown RBP18.88■□□□□ 0.61
SSBP4-204ENST00000597724 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-204ENST00000597724 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-204ENST00000597724 RSPH10B2B2RC85 870 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 TBX3O15119 743 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 CHMP2AO43633 222 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 HBP1O60381 514 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 NBNO60934 754 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 CXCL10P02778 98 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 RSPH10BP0C881 870 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 RPAINQ86UA6 219 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms