RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
VRK3-213ENST00000597215 SNX17Q15036 470 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 EPHA7Q15375 998 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 ATL3Q6DD88 541 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 SWSAP1Q6NVH7 229 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 PDXDC2PQ6P474 469 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 FTOQ9C0B1 505 aaKnown RBP eCLIP16.15■□□□□ 0.18
VRK3-213ENST00000597215 GABBR1Q9UBS5 961 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 CIZ1Q9ULV3 898 aaPredicted RBP16.15■□□□□ 0.18
VRK3-213ENST00000597215 ZDHHC9Q9Y397 364 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 ATP6V1DQ9Y5K8 247 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 CLIC4Q9Y696 253 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 GRIN2DO15399 1336 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 MROH7Q68CQ1 1323 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 IGSF9BQ9UPX0 1349 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 MARK3P27448 753 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 RTP1P59025 263 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 PTPN11Q06124 597 aaPredicted RBP16.14■□□□□ 0.17
VRK3-213ENST00000597215 LRRC26Q2I0M4 334 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 FAM47CQ5HY64 1035 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 C7orf31Q8N865 590 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 NEK9Q8TD19 979 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
VRK3-213ENST00000597215 ATP6V0A1Q93050 837 aa16.14■□□□□ 0.17
VRK3-213ENST00000597215 MAFBQ9Y5Q3 323 aaPredicted RBP16.14■□□□□ 0.17
VRK3-213ENST00000597215 POTEMA6NI47 508 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 DKC1O60832 514 aaKnown RBP eCLIP16.13■□□□□ 0.17
VRK3-213ENST00000597215 P4HBP07237 508 aaKnown RBP16.13■□□□□ 0.17
VRK3-213ENST00000597215 NASPP49321 788 aaPredicted RBP16.13■□□□□ 0.17
VRK3-213ENST00000597215 RGS19P49795 217 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 CDK7P50613 346 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 CEBPZQ03701 1054 aaKnown RBP16.13■□□□□ 0.17
VRK3-213ENST00000597215 PDIA5Q14554 519 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 PTPAQ15257 358 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 FOXD4L6Q3SYB3 417 aaPredicted RBP16.13■□□□□ 0.17
VRK3-213ENST00000597215 TRIM60Q495X7 471 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 FOXD4L3Q6VB84 417 aaPredicted RBP16.13■□□□□ 0.17
VRK3-213ENST00000597215 SESTD1Q86VW0 696 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 CKAP2LQ8IYA6 745 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 ERMNQ8TAM6 284 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 FAM167AQ96KS9 214 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
VRK3-213ENST00000597215 STK24Q9Y6E0 443 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 MORC2Q9Y6X9 1032 aaPredicted RBP16.13■□□□□ 0.17
VRK3-213ENST00000597215 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
VRK3-213ENST00000597215 KAT6AQ92794 2004 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 POTEB3A0JP26 581 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 YEATS4O95619 227 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 SMIM10L2AP0DMW4 78 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 SMIM10L2BP0DMW5 78 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 QARSP47897 775 aaKnown RBP16.12■□□□□ 0.17
VRK3-213ENST00000597215 PSMC5P62195 406 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 PLCB4Q15147 1175 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 STK38Q15208 465 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 UGCGQ16739 394 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 POTEBQ6S5H4 581 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 ANKRD33Q7Z3H0 272 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 IGSF22Q8N9C0 903 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 BANK1Q8NDB2 785 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 ATP8B4Q8TF62 1192 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 EIF2AK1Q9BQI3 630 aaKnown RBP16.12■□□□□ 0.17
VRK3-213ENST00000597215 RNPEPQ9H4A4 650 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 HDAC6Q9UBN7 1215 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 LRWD1Q9UFC0 647 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 CFAP45Q9UL16 551 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 TRPC6Q9Y210 931 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 ATP11BQ9Y2G3 1177 aa16.12■□□□□ 0.17
VRK3-213ENST00000597215 VWA3AA6NCI4 1184 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 TLR3O15455 904 aaKnown RBP16.11■□□□□ 0.17
VRK3-213ENST00000597215 HBP1O60381 514 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 PQBP1O60828 265 aaKnown RBP16.11■□□□□ 0.17
VRK3-213ENST00000597215 GNAT1P11488 350 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 PRKCEQ02156 737 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 DNM1Q05193 864 aaKnown RBP16.11■□□□□ 0.17
VRK3-213ENST00000597215 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 SLC39A14Q15043 492 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 IL17AQ16552 155 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 HAUS3Q68CZ6 603 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 PPP1R13LQ8WUF5 828 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 BBXQ8WY36 941 aaPredicted RBP16.11■□□□□ 0.17
VRK3-213ENST00000597215 DYDC2Q96IM9 177 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 TOX2Q96NM4 488 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 LXNQ9BS40 222 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 TFIP11Q9UBB9 837 aaKnown RBP16.11■□□□□ 0.17
VRK3-213ENST00000597215 GTF2IRD1Q9UHL9 959 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 NRCAMQ92823 1304 aa16.11■□□□□ 0.17
VRK3-213ENST00000597215 C17orf102A2RUQ5 167 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 DCDC2CA8MYV0 355 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 ZNF862O60290 1169 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 OATP04181 439 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 ATP4AP20648 1035 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 MARCKSP29966 332 aaPredicted RBP16.1■□□□□ 0.17
VRK3-213ENST00000597215 KRT85P78386 507 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 TLE2Q04725 743 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 GDF6Q6KF10 455 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms