RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 BANK1Q8NDB2 785 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 SMARCE1Q969G3 411 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 LXNQ9BS40 222 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 TRIM9Q9C026 710 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 TSPY26PQ9H489 355 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 SAGE1Q9NXZ1 904 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
SHKBP1-211ENST00000595945 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 GSTTP1A0A1W2PQM5 241 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 MYMKA6NI61 221 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 KLRC4O43908 158 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 SMC2O95347 1197 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 PSAPP07602 524 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 SUPT20HL2P0C7V6 817 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 TXNP10599 105 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 CYP2B6P20813 491 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 QARSP47897 775 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 SLC12A3P55017 1021 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 NLRP12P59046 1061 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 PSMC5P62195 406 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 AMPD3Q01432 767 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 MORC3Q14149 939 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 GSE1Q14687 1217 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 CCL14Q16627 93 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 UGCGQ16739 394 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 TPH2Q8IWU9 490 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 C4orf19Q8IY42 314 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 SYT2Q8N9I0 419 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 GSDMAQ96QA5 445 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 LRRC27Q9C0I9 530 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 BLZF1Q9H2G9 400 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 MAN1B1Q9UKM7 699 aa16.47■□□□□ 0.23
SHKBP1-211ENST00000595945 IGSF9BQ9UPX0 1349 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 A0A087WWV3 80 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 GPR25O00155 361 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 SORBS3O60504 671 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 STBD1O95210 358 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 HSPA6P17066 643 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 KIF22Q14807 665 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 STX1AQ16623 288 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 TMEM63BQ5T3F8 832 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 TRIML1Q8N9V2 468 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 COPS5Q92905 334 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 GABRQQ9UN88 632 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 SAMM50Q9Y512 469 aa16.46■□□□□ 0.23
SHKBP1-211ENST00000595945 ZBTB39O15060 712 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 ZNF865P0CJ78 1059 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 XRCC6P12956 609 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 CYP11B2P19099 503 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 BMP6P22004 513 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 ADCYAP1R1P41586 468 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 ARHGAP1Q07960 439 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 KCNB1Q14721 858 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 DUSP28Q4G0W2 176 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 IQSEC1Q6DN90 963 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 CCDC60Q8IWA6 550 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 SEPT1Q8WYJ6 367 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 EMID1Q96A84 441 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 PCYT2Q99447 389 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 GPR20Q99678 358 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 ANO10Q9NW15 660 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 GABBR1Q9UBS5 961 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 DBR1Q9UK59 544 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 KAT6AQ92794 2004 aa16.45■□□□□ 0.22
SHKBP1-211ENST00000595945 BIN1O00499 593 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 ZNF862O60290 1169 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 DKC1O60832 514 aaKnown RBP eCLIP16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 LGR5O75473 907 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 GH1P01241 217 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 SMPD1P17405 629 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 SP4Q02446 784 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 PRKCZQ05513 592 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 DHX8Q14562 1220 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 ARSHQ5FYA8 562 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 GPBP1Q86WP2 473 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 DHX37Q8IY37 1157 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 PIGOQ8TEQ8 1089 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 ATP6V0A1Q93050 837 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 BHMT2Q9H2M3 363 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 MLXIPQ9HAP2 919 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 MAFBQ9Y5Q3 323 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-211ENST00000595945 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 PVALEFA0A1B0GWK0 134 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 RHOBTB3O94955 611 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 CYP2C19P33261 490 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 FLT3LGP49771 235 aa16.43■□□□□ 0.22
SHKBP1-211ENST00000595945 ASIC1P78348 528 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms