RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 UHRF1Q96T88 793 aaPredicted RBP19.45■□□□□ 0.7
CCDC9-202ENST00000595659 YME1L1Q96TA2 773 aa19.45■□□□□ 0.7
CCDC9-202ENST00000595659 SDF4Q9BRK5 362 aa19.45■□□□□ 0.7
CCDC9-202ENST00000595659 FAM49AQ9H0Q0 323 aaPredicted RBP19.45■□□□□ 0.7
CCDC9-202ENST00000595659 AGO4Q9HCK5 861 aaKnown RBP19.45■□□□□ 0.7
CCDC9-202ENST00000595659 BMP1P13497 986 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 HSPA4P34932 840 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 HTRA4P83105 476 aaPredicted RBP19.44■□□□□ 0.7
CCDC9-202ENST00000595659 TAF2Q6P1X5 1199 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 BLOC1S2Q6QNY1 142 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 TRAPPC12Q8WVT3 735 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 AZI2Q9H6S1 392 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 TRPC6Q9Y210 931 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 MYO9BQ13459 2157 aa19.44■□□□□ 0.7
CCDC9-202ENST00000595659 REV3LO60673 3130 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 MEIS1O00470 390 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 SCG2P13521 617 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 SREBF1P36956 1147 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 MGAT3Q09327 533 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 TMEM62Q0P6H9 643 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 LPIN1Q14693 890 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 PFKFB3Q16875 520 aaPredicted RBP19.43■□□□□ 0.7
CCDC9-202ENST00000595659 RSPH3Q86UC2 560 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 FBXO22Q8NEZ5 403 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 PHKBQ93100 1093 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 CDY2AQ9Y6F7 541 aa19.43■□□□□ 0.7
CCDC9-202ENST00000595659 XIRP2A4UGR9 3374 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 DOCK5Q9H7D0 1870 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 MBLAC1A4D2B0 266 aaPredicted RBP19.42■□□□□ 0.7
CCDC9-202ENST00000595659 FAM86B1E9PN63 330 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 hCG_1984214I3L0E3 225 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 CCNE2O96020 404 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 FAM86B2P0C5J1 330 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 CLK2P49760 499 aaKnown RBP19.42■□□□□ 0.7
CCDC9-202ENST00000595659 AP3B2Q13367 1082 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 PLCB4Q15147 1175 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 ZNF713Q8N859 430 aaPredicted RBP19.42■□□□□ 0.7
CCDC9-202ENST00000595659 APBB2Q92870 758 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 HLA-CQ95604 372 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 PTPRSQ13332 1948 aa19.42■□□□□ 0.7
CCDC9-202ENST00000595659 CCDC196A0A1B0GTZ2 297 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 RPS6KB1P23443 525 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 STAT5BP51692 787 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 RCAN1P53805 252 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 AAK1Q2M2I8 961 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 RPAINQ86UA6 219 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 PLA2G4DQ86XP0 818 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 SP7Q8TDD2 431 aaPredicted RBP19.41■□□□□ 0.7
CCDC9-202ENST00000595659 GLT8D2Q9H1C3 349 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 NFASCO94856 1347 aa19.41■□□□□ 0.7
CCDC9-202ENST00000595659 RRN3P2A6NIE6 340 aa19.4■□□□□ 0.7
CCDC9-202ENST00000595659 MRPS6P82932 125 aaKnown RBP19.4■□□□□ 0.7
CCDC9-202ENST00000595659 PKN1Q16512 942 aa19.4■□□□□ 0.7
CCDC9-202ENST00000595659 EPC2Q52LR7 807 aa19.4■□□□□ 0.7
CCDC9-202ENST00000595659 FBXO47Q5MNV8 452 aa19.4■□□□□ 0.7
CCDC9-202ENST00000595659 RASGRP4Q8TDF6 673 aa19.4■□□□□ 0.7
CCDC9-202ENST00000595659 AGO3Q9H9G7 860 aaKnown RBP19.4■□□□□ 0.7
CCDC9-202ENST00000595659 NCOA5Q9HCD5 579 aaKnown RBP19.4■□□□□ 0.7
CCDC9-202ENST00000595659 LMCD1Q9NZU5 365 aa19.4■□□□□ 0.7
CCDC9-202ENST00000595659 COG5Q9UP83 839 aa19.4■□□□□ 0.7
CCDC9-202ENST00000595659 POTEB3A0JP26 581 aa19.39■□□□□ 0.69
CCDC9-202ENST00000595659 ENPP3O14638 875 aa19.39■□□□□ 0.69
CCDC9-202ENST00000595659 BACH1O14867 736 aa19.39■□□□□ 0.69
CCDC9-202ENST00000595659 PRPF3O43395 683 aaKnown RBP19.39■□□□□ 0.69
CCDC9-202ENST00000595659 CD52P31358 61 aa19.39■□□□□ 0.69
CCDC9-202ENST00000595659 CCT2P78371 535 aaKnown RBP19.39■□□□□ 0.69
CCDC9-202ENST00000595659 POTEBQ6S5H4 581 aa19.39■□□□□ 0.69
CCDC9-202ENST00000595659 PLPPR4Q7Z2D5 763 aa19.39■□□□□ 0.69
CCDC9-202ENST00000595659 LARP6Q9BRS8 491 aaKnown RBP19.39■□□□□ 0.69
CCDC9-202ENST00000595659 SLC26A6Q9BXS9 759 aa19.39■□□□□ 0.69
CCDC9-202ENST00000595659 PRRC2BQ5JSZ5 2229 aaKnown RBP19.39■□□□□ 0.69
CCDC9-202ENST00000595659 TRANK1O15050 2925 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 ATG7O95352 703 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 AKAP17AQ02040 695 aaKnown RBP19.38■□□□□ 0.69
CCDC9-202ENST00000595659 GPM6BQ13491 265 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 TRMT1LQ7Z2T5 733 aaKnown RBP19.38■□□□□ 0.69
CCDC9-202ENST00000595659 TEX2Q8IWB9 1127 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 TMEM192Q8IY95 271 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 IL17RAQ96F46 866 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 ZMYND12Q9H0C1 365 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 C6orf50Q9HD87 102 aa19.38■□□□□ 0.69
CCDC9-202ENST00000595659 IGLV3-22A0A075B6J6 115 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 IPO5O00410 1097 aaKnown RBP19.37■□□□□ 0.69
CCDC9-202ENST00000595659 DHX15O43143 795 aaKnown RBP19.37■□□□□ 0.69
CCDC9-202ENST00000595659 REC8O95072 547 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 IBSPP21815 317 aaPredicted RBP19.37■□□□□ 0.69
CCDC9-202ENST00000595659 PSMA5P28066 241 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 PDIA3P30101 505 aaKnown RBP19.37■□□□□ 0.69
CCDC9-202ENST00000595659 NTRK3Q16288 839 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 IER5Q5VY09 327 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 SWSAP1Q6NVH7 229 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 MTHFD1LQ6UB35 978 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 ABHD15Q6UXT9 468 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 TSHZ1Q6ZSZ6 1077 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 NIPA1Q7RTP0 329 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 CCDC60Q8IWA6 550 aaPredicted RBP19.37■□□□□ 0.69
CCDC9-202ENST00000595659 REXO1Q8N1G1 1221 aaKnown RBP19.37■□□□□ 0.69
CCDC9-202ENST00000595659 LINC01599Q8WXQ3 324 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 ZNF577Q9BSK1 485 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 PCDHA2Q9Y5H9 948 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms