RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ARID2Q68CP9 1835 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 SLC37A4O43826 429 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 MMP1P03956 469 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 SELPP16109 830 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 XBP1P17861 261 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 FOSBP53539 338 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 PLCB4Q15147 1175 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 TCTN1Q2MV58 587 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 Q4G0T1 1027 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 ZNF618Q5T7W0 954 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 MOXD1Q6UVY6 613 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 LRRC8DQ7L1W4 858 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 OTOP2Q7RTS6 562 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 DEFB128Q7Z7B8 93 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 HERVK_113Q902F9 699 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 SLC5A5Q92911 643 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 ZBTB10Q96DT7 871 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 TBC1D22BQ9NU19 505 aa12.46□□□□□ -0.41
SHKBP1-206ENST00000595523 NRCAMQ92823 1304 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 CCDC194A0A1B0GVG4 234 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 NBNO60934 754 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 FGBP02675 491 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 ATP4AP20648 1035 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 RFC2P35250 354 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 STAT5BP51692 787 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 GRIK4Q16099 956 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 KRT40Q6A162 431 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 ZNF746Q6NUN9 644 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 GPR153Q6NV75 609 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 RUFY4Q6ZNE9 571 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 PIK3AP1Q6ZUJ8 805 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 PLPPR4Q7Z2D5 763 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 ETNPPLQ8TBG4 499 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 LLPHQ9BRT6 129 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 BACH2Q9BYV9 841 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 OSBPL7Q9BZF2 842 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 UPF2Q9HAU5 1272 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 REV3LO60673 3130 aa12.45□□□□□ -0.42
SHKBP1-206ENST00000595523 MBLAC1A4D2B0 266 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 GRXCR1A8MXD5 290 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 BTBD18B2RXH4 712 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 WNT7AO00755 349 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 PSMD10O75832 226 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 CXCL10P02778 98 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 PFKMP08237 780 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 INSRRP14616 1297 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 KRT2P35908 639 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 SMAD3P84022 425 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 KRT76Q01546 638 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 B3GNT9Q6UX72 402 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 Q7L0L9 218 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 NEK8Q86SG6 692 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 DIS3L2Q8IYB7 885 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 TRAPPC12Q8WVT3 735 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 RIT2Q99578 217 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 UNC45AQ9H3U1 944 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 DDX25Q9UHL0 483 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 MAFBQ9Y5Q3 323 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 PRUNE2Q8WUY3 3088 aa12.44□□□□□ -0.42
SHKBP1-206ENST00000595523 IGSF9BQ9UPX0 1349 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 ZBTB42B2RXF5 422 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 BACH1O14867 736 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 ST18O60284 1047 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 GAS7O60861 476 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 GNAT1P11488 350 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 THPOP40225 353 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 IGBP1P78318 339 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 GUCY1B3Q02153 619 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 UGCGQ16739 394 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 PPP4R3AQ6IN85 833 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 SWSAP1Q6NVH7 229 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 MIS18BP1Q6P0N0 1132 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 SMAP1Q8IYB5 467 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 TMX3Q96JJ7 454 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 KCNMB3Q9NPA1 279 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 ZNF302Q9NR11 478 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 PCDHA10Q9Y5I2 948 aa12.43□□□□□ -0.42
SHKBP1-206ENST00000595523 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 POTEB3A0JP26 581 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 WDR64B1ANS9 1081 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 RSPH10B2B2RC85 870 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 CHMP2AO43633 222 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 ZNF862O60290 1169 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 CAND2O75155 1236 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 CTSHP09668 335 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 RSPH10BP0C881 870 aa12.42□□□□□ -0.42
SHKBP1-206ENST00000595523 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms