RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CFBP00751 764 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 CCDC175P0C221 793 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 FAM86B2P0C5J1 330 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 CTAGE8P0CG41 777 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 CCT6AP40227 531 aaKnown RBP16.93■□□□□ 0.3
PNKP-204ENST00000594661 ARHGAP25P42331 645 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 EPS15P42566 896 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 SMTNP53814 917 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 HIRAP54198 1017 aaPredicted RBP16.93■□□□□ 0.3
PNKP-204ENST00000594661 ECM1Q16610 540 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 PRR16Q569H4 304 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 KRT79Q5XKE5 535 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 CTAGE6Q86UF2 777 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 APOBEC3FQ8IUX4 373 aaKnown RBP16.93■□□□□ 0.3
PNKP-204ENST00000594661 CTAGE4Q8IX94 777 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 KLC4Q9NSK0 619 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 ETAA1Q9NY74 926 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 GGA3Q9NZ52 723 aa16.93■□□□□ 0.3
PNKP-204ENST00000594661 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
PNKP-204ENST00000594661 MEFVO15553 781 aaPredicted RBP16.92■□□□□ 0.3
PNKP-204ENST00000594661 MCM3P25205 808 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 TRAF1Q13077 416 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 KRT31Q15323 416 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 TMEM119Q4V9L6 283 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 KCNK18Q7Z418 384 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 LDHDQ86WU2 507 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 ADSSL1Q8N142 457 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 ETNPPLQ8TBG4 499 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 MAGEC3Q8TD91 643 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 COG1Q8WTW3 980 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 CDK5RAP3Q96JB5 506 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 SH3GL3Q99963 347 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 CAPS2Q9BXY5 557 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 GINM1Q9NU53 330 aa16.92■□□□□ 0.3
PNKP-204ENST00000594661 KIF5CO60282 957 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 RASSF9O75901 435 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 KIAA0754O94854 1291 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 RHOBTB3O94955 611 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
PNKP-204ENST00000594661 SPAG1Q07617 926 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 MTMR2Q13614 643 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 Q4G0T1 1027 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 DCAF15Q66K64 600 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 TLDC1Q6P9B6 456 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 PPFIBP1Q86W92 1011 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 OTUD6BQ8N6M0 293 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 ARMC2Q8NEN0 867 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 LPAR1Q92633 364 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 FAM210AQ96ND0 272 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
PNKP-204ENST00000594661 STK17AQ9UEE5 414 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 LIMA1Q9UHB6 759 aaKnown RBP16.91■□□□□ 0.3
PNKP-204ENST00000594661 AKR1B15C9JRZ8 316 aaPredicted RBP16.91■□□□□ 0.3
PNKP-204ENST00000594661 PBX1P40424 430 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 STAT3P40763 770 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 STIM1Q13586 685 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 AP1ARQ63HQ0 302 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 LARP4BQ92615 738 aaKnown RBP16.91■□□□□ 0.3
PNKP-204ENST00000594661 AGBL1Q96MI9 1066 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 ZNF112Q9UJU3 913 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 MRPL11Q9Y3B7 192 aaKnown RBP16.91■□□□□ 0.3
PNKP-204ENST00000594661 ZNF536O15090 1300 aa16.91■□□□□ 0.3
PNKP-204ENST00000594661 TRIM49BA6NDI0 452 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 A6NNZ2 444 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 KCNJ18B7U540 433 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
PNKP-204ENST00000594661 N4BP3O15049 544 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 POLR2MP0CAP2 368 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 CIITAP33076 1130 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 ASIC1P78348 528 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 KCNJ12Q14500 433 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 TUBB8Q3ZCM7 444 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 TCP11X2Q5H9J9 407 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 SV2BQ7L1I2 683 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 CYP2W1Q8TAV3 490 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 RAD54LQ92698 747 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 BORCS6Q96GS4 357 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 WRNIP1Q96S55 665 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 SH3GL2Q99962 352 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 SLF1Q9BQI6 1058 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 VPS16Q9H269 839 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 EMILIN3Q9NT22 766 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 SSC5DA1L4H1 1573 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 CTAGE9A4FU28 777 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 GOLGA6CA6NDK9 693 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 MYMKA6NI61 221 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 AGPSO00116 658 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 CYP3A4P08684 503 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 GOLGA6DP0CG33 693 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 VCAM1P19320 739 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 GGCXP38435 758 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 COPB1P53618 953 aaKnown RBP16.9■□□□□ 0.3
PNKP-204ENST00000594661 RBL2Q08999 1139 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 CEP85LQ5SZL2 805 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 SLFN12Q8IYM2 578 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 SCYL3Q8IZE3 742 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 GIMAP8Q8ND71 665 aaPredicted RBP16.9■□□□□ 0.3
PNKP-204ENST00000594661 CPLX3Q8WVH0 158 aa16.9■□□□□ 0.3
PNKP-204ENST00000594661 CCDC47Q96A33 483 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms