RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 ARP10275 920 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 PSMA5P28066 241 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 ERVK-21P61565 698 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 AKAP17AQ02040 695 aaKnown RBP18.41■□□□□ 0.54
CIRBP-241ENST00000593048 PFKFB3Q16875 520 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-241ENST00000593048 FAM26DQ5JW98 314 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 JAKMIP3Q5VZ66 844 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 CCDC12Q8WUD4 166 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-241ENST00000593048 KCNB2Q92953 911 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 YME1L1Q96TA2 773 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 AGO4Q9HCK5 861 aaKnown RBP18.41■□□□□ 0.54
CIRBP-241ENST00000593048 TRPC6Q9Y210 931 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 NFASCO94856 1347 aa18.41■□□□□ 0.54
CIRBP-241ENST00000593048 CHRNA1P02708 482 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 GHRP10912 638 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 SCG2P13521 617 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 SREBF1P36956 1147 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 ACTR2P61160 394 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 RPAINQ86UA6 219 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 ADAMTS19Q8TE59 1207 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 DNAJB3Q8WWF6 145 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 TOP1MTQ969P6 601 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 OSBPL7Q9BZF2 842 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 SUGCTQ9HAC7 445 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 C6orf50Q9HD87 102 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 LMCD1Q9NZU5 365 aa18.4■□□□□ 0.54
CIRBP-241ENST00000593048 DDX39AO00148 427 aaKnown RBP18.39■□□□□ 0.53
CIRBP-241ENST00000593048 MEIS1O00470 390 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 LPXNO60711 386 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 INSRRP14616 1297 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 COL9A1P20849 921 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 RPS6KB1P23443 525 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 CLK2P49760 499 aaKnown RBP18.39■□□□□ 0.53
CIRBP-241ENST00000593048 STAT5BP51692 787 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 HTRA4P83105 476 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-241ENST00000593048 TFF2Q03403 129 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 FBXO22Q8NEZ5 403 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 PCYT2Q99447 389 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 FAM49AQ9H0Q0 323 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-241ENST00000593048 COG5Q9UP83 839 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 REV3LO60673 3130 aa18.39■□□□□ 0.53
CIRBP-241ENST00000593048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-241ENST00000593048 MBLAC1A4D2B0 266 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-241ENST00000593048 M0QZ92 97 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 BACH1O14867 736 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 RPLP2P05387 115 aaKnown RBP18.38■□□□□ 0.53
CIRBP-241ENST00000593048 MKRN4PQ13434 485 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-241ENST00000593048 MARCH8Q5T0T0 291 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 IER5Q5VY09 327 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 MCTP2Q6DN12 878 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 PLPPR4Q7Z2D5 763 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 PLA2G4DQ86XP0 818 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 UHRF1Q96T88 793 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-241ENST00000593048 C17orf80Q9BSJ5 609 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 CDY2AQ9Y6F7 541 aa18.38■□□□□ 0.53
CIRBP-241ENST00000593048 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 TRANK1O15050 2925 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 PRPF3O43395 683 aaKnown RBP18.37■□□□□ 0.53
CIRBP-241ENST00000593048 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
CIRBP-241ENST00000593048 GNA11P29992 359 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 ITGB3BPQ13352 177 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-241ENST00000593048 PLCB4Q15147 1175 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 FAM160B1Q5W0V3 765 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 NIPA1Q7RTP0 329 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 REXO1Q8N1G1 1221 aaKnown RBP18.37■□□□□ 0.53
CIRBP-241ENST00000593048 PHKBQ93100 1093 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 HLA-CQ95604 372 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 ZMYND12Q9H0C1 365 aa18.37■□□□□ 0.53
CIRBP-241ENST00000593048 TCF20Q9UGU0 1960 aaKnown RBP18.37■□□□□ 0.53
CIRBP-241ENST00000593048 ESYT2A0FGR8 921 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 POTEB3A0JP26 581 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 BDP1A6H8Y1 2624 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 MRPS6P82932 125 aaKnown RBP18.36■□□□□ 0.53
CIRBP-241ENST00000593048 MGAT3Q09327 533 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 LPIN1Q14693 890 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 PRRC2BQ5JSZ5 2229 aaKnown RBP18.36■□□□□ 0.53
CIRBP-241ENST00000593048 POTEBQ6S5H4 581 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 FBXL16Q8N461 479 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 BICD2Q8TD16 824 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 SP7Q8TDD2 431 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-241ENST00000593048 ZBTB10Q96DT7 871 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 SAMD11Q96NU1 681 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 SLC26A6Q9BXS9 759 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 BACH2Q9BYV9 841 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 TCEAL9Q9UHQ7 104 aa18.36■□□□□ 0.53
CIRBP-241ENST00000593048 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
CIRBP-241ENST00000593048 FAM86B1E9PN63 330 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 ATG7O95352 703 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 CYP3A4P08684 503 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 FAM86B2P0C5J1 330 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 SLC26A2P50443 739 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 KCNQ1P51787 676 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 CCT2P78371 535 aaKnown RBP18.35■□□□□ 0.53
CIRBP-241ENST00000593048 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 PKN1Q16512 942 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 EPC2Q52LR7 807 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 FBXO47Q5MNV8 452 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 TSHZ1Q6ZSZ6 1077 aa18.35■□□□□ 0.53
CIRBP-241ENST00000593048 CCDC148Q8NFR7 591 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 603.6 ms