RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 UBE2OQ9C0C9 1292 aaKnown RBP17.32■□□□□ 0.36
TRIM47-206ENST00000592942 ZNF215Q9UL58 517 aaPredicted RBP17.32■□□□□ 0.36
TRIM47-206ENST00000592942 PCDHA10Q9Y5I2 948 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 MAFBQ9Y5Q3 323 aaPredicted RBP17.32■□□□□ 0.36
TRIM47-206ENST00000592942 A0A0C4DFX4 3053 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 C17orf102A2RUQ5 167 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 GAS7O60861 476 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 CSF2RAP15509 400 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 CCL23P55773 120 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 RBL2Q08999 1139 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 PTK7Q13308 1070 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 MIS18BP1Q6P0N0 1132 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 TRAF7Q6Q0C0 670 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 SERINC5Q86VE9 423 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 LMBR1Q8WVP7 490 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 FAM20AQ96MK3 541 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 TEKT3Q9BXF9 490 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 DISC1Q9NRI5 854 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 VAV3Q9UKW4 847 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-206ENST00000592942 LAMA3Q16787 3333 aa17.31■□□□□ 0.36
TRIM47-206ENST00000592942 NRCAMQ92823 1304 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 EML1O00423 815 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 TBX3O15119 743 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 IQCF3P0C7M6 154 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 INSRRP14616 1297 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
TRIM47-206ENST00000592942 SHHQ15465 462 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 C9orf50Q5SZB4 431 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 NOSTRINQ8IVI9 506 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 SCLYQ96I15 445 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 MTMR9Q96QG7 549 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 NAP1L4Q99733 375 aaKnown RBP17.3■□□□□ 0.36
TRIM47-206ENST00000592942 AZI2Q9H6S1 392 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 ZNF302Q9NR11 478 aa17.3■□□□□ 0.36
TRIM47-206ENST00000592942 TRIOBPQ9H2D6 2365 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 MBLAC1A4D2B0 266 aaPredicted RBP17.29■□□□□ 0.36
TRIM47-206ENST00000592942 WDR64B1ANS9 1081 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 K7ELQ4 463 aaPredicted RBP17.29■□□□□ 0.36
TRIM47-206ENST00000592942 ZNF862O60290 1169 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 PSAPP07602 524 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 CKBP12277 381 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 SLC26A2P50443 739 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 FPGSQ05932 587 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 SPIRE1Q08AE8 756 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 PPP2R5CQ13362 524 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 GRIK4Q16099 956 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 TMEM199Q8N511 208 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 TMEM60Q9H2L4 133 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 GABBR1Q9UBS5 961 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
TRIM47-206ENST00000592942 A0A1W2PPC1 479 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 POTEB3A0JP26 581 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 ZBTB42B2RXF5 422 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 BACH1O14867 736 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 STBD1O95210 358 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 ACRP10323 421 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 BFSP2Q13515 415 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 UGCGQ16739 394 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 TMEM240Q5SV17 173 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 FAM160B1Q5W0V3 765 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 PDXDC2PQ6P474 469 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 POTEBQ6S5H4 581 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 TDHQ8IZJ6 230 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 C4orf32Q8N8J7 132 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 RDM1Q8NG50 284 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 CAGE1Q8TC20 777 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 ATP8B4Q8TF62 1192 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 ZBTB10Q96DT7 871 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 INTS4Q96HW7 963 aaKnown RBP17.28■□□□□ 0.36
TRIM47-206ENST00000592942 KIF3AQ9Y496 699 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 KAT6AQ92794 2004 aa17.28■□□□□ 0.36
TRIM47-206ENST00000592942 WDR81Q562E7 1941 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 CHMP2AO43633 222 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 GNAT1P11488 350 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 SFNP31947 248 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 ZNF174Q15697 407 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 ZNF618Q5T7W0 954 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 LARP1BQ659C4 914 aaKnown RBP17.27■□□□□ 0.36
TRIM47-206ENST00000592942 RUFY4Q6ZNE9 571 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 TRAPPC12Q8WVT3 735 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.27■□□□□ 0.364e-7■■□□□ 13.7
TRIM47-206ENST00000592942 OSBPL7Q9BZF2 842 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 IL23AQ9NPF7 189 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 SAMM50Q9Y512 469 aa17.27■□□□□ 0.36
TRIM47-206ENST00000592942 IGSF9BQ9UPX0 1349 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 RRN3P2A6NIE6 340 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 HBP1O60381 514 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 SELPP16109 830 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 MCM7P33993 719 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 TRAPPC10P48553 1259 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 JAK3P52333 1124 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 PPIGQ13427 754 aaKnown RBP eCLIP17.26■□□□□ 0.358e-9■□□□□ 9.9
TRIM47-206ENST00000592942 NBR1Q14596 966 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms