RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 V9GY48 417 aaPredicted RBP15.16■□□□□ 0.02
APOC1-209ENST00000592885 SMCO2A6NFE2 343 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 MARK3P27448 753 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 CDC27P30260 824 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 HSPA4P34932 840 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 SLC26A2P50443 739 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 PFKFB3Q16875 520 aaPredicted RBP15.15■□□□□ 0.02
APOC1-209ENST00000592885 FAM117BQ6P1L5 589 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 FAM43BQ6ZT52 329 aaPredicted RBP15.15■□□□□ 0.02
APOC1-209ENST00000592885 PLPPR4Q7Z2D5 763 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 YME1L1Q96TA2 773 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 SUGCTQ9HAC7 445 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 FAM217BQ9NTX9 383 aaPredicted RBP15.15■□□□□ 0.02
APOC1-209ENST00000592885 PKD2L1Q9P0L9 805 aa15.15■□□□□ 0.02
APOC1-209ENST00000592885 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.14■□□□□ 0.01
APOC1-209ENST00000592885 MEIS1O00470 390 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
APOC1-209ENST00000592885 REC8O95072 547 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 CHRNA1P02708 482 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 SCG2P13521 617 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 ACTR2P61160 394 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 MARCH8Q5T0T0 291 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 KRT40Q6A162 431 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 BLOC1S2Q6QNY1 142 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 RUFY4Q6ZNE9 571 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 HLA-CQ95604 372 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 PCYT2Q99447 389 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 AGXT2Q9BYV1 514 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 AGO4Q9HCK5 861 aaKnown RBP15.14■□□□□ 0.01
APOC1-209ENST00000592885 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 SQORQ9Y6N5 450 aa15.14■□□□□ 0.01
APOC1-209ENST00000592885 ATG7O95352 703 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 CYP3A4P08684 503 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 GHRP10912 638 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 BMP1P13497 986 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 PSMA5P28066 241 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 MRPS6P82932 125 aaKnown RBP15.13■□□□□ 0.01
APOC1-209ENST00000592885 SETQ01105 290 aaPredicted RBP15.13■□□□□ 0.01
APOC1-209ENST00000592885 LPIN1Q14693 890 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 PTPROQ16827 1216 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 TSHZ1Q6ZSZ6 1077 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 Q6ZUG5 572 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 CCDC136Q96JN2 1154 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 PGBD1Q96JS3 809 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 JAKMIP1Q96N16 626 aaKnown RBP15.13■□□□□ 0.01
APOC1-209ENST00000592885 ZMYND12Q9H0C1 365 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 C6orf50Q9HD87 102 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 NAP1L2Q9ULW6 460 aaPredicted RBP15.13■□□□□ 0.01
APOC1-209ENST00000592885 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 RWDD3Q9Y3V2 267 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 SNX14Q9Y5W7 946 aa15.13■□□□□ 0.01
APOC1-209ENST00000592885 IGKV6D-21A0A0A0MT36 114 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 M0QZ92 97 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 ARP10275 920 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 INSRRP14616 1297 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 RPS6KB1P23443 525 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 GNA11P29992 359 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 ZNF76P36508 570 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 STAT5BP51692 787 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 TFF2Q03403 129 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 APOBRQ0VD83 1088 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 ITGB3BPQ13352 177 aaPredicted RBP15.12■□□□□ 0.01
APOC1-209ENST00000592885 PLCB4Q15147 1175 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 TIGD5Q53EQ6 642 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 FBXO47Q5MNV8 452 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 IER5Q5VY09 327 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 FAM160B1Q5W0V3 765 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 REXO1Q8N1G1 1221 aaKnown RBP15.12■□□□□ 0.01
APOC1-209ENST00000592885 CYP2W1Q8TAV3 490 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 DNAJB3Q8WWF6 145 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 CRYGNQ8WXF5 182 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 BRF1Q92994 677 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 C17orf80Q9BSJ5 609 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 FTHL17Q9BXU8 183 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 OSBPL7Q9BZF2 842 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 TMEM260Q9NX78 707 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 PCDHA2Q9Y5H9 948 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 CDY2AQ9Y6F7 541 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 NCOR1O75376 2440 aa15.12■□□□□ 0.01
APOC1-209ENST00000592885 COL1A2P08123 1366 aa15.11■□□□□ 0.01
APOC1-209ENST00000592885 PRPF3O43395 683 aaKnown RBP15.11■□□□□ 0.01
APOC1-209ENST00000592885 ADD1P35611 737 aaKnown RBP15.11■□□□□ 0.01
APOC1-209ENST00000592885 EPC2Q52LR7 807 aa15.11■□□□□ 0.01
APOC1-209ENST00000592885 NME8Q8N427 588 aa15.11■□□□□ 0.01
APOC1-209ENST00000592885 CCDC148Q8NFR7 591 aa15.11■□□□□ 0.01
APOC1-209ENST00000592885 BICD2Q8TD16 824 aa15.11■□□□□ 0.01
APOC1-209ENST00000592885 MRPL38Q96DV4 380 aaKnown RBP15.11■□□□□ 0.01
APOC1-209ENST00000592885 RNF26Q9BY78 433 aaPredicted RBP15.11■□□□□ 0.01
APOC1-209ENST00000592885 TRPV2Q9Y5S1 764 aa15.11■□□□□ 0.01
APOC1-209ENST00000592885 KDM3AQ9Y4C1 1321 aa15.11■□□□□ 0.01
APOC1-209ENST00000592885 TTC3P53804 2025 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 MUC3AQ02505 3323 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 IGLV3-22A0A075B6J6 115 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 SMIM35A0A1B0GVV1 85 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 POTEB3A0JP26 581 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 H3BNC9 293 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 HBP1O60381 514 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 UPP2O95045 317 aa15.1■□□□□ 0.01
APOC1-209ENST00000592885 KCNQ1P51787 676 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms