RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 RUFY4Q6ZNE9 571 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 IL17RAQ96F46 866 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 SLC28A3Q9HAS3 691 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 TUBE1Q9UJT0 475 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 PCDHA11Q9Y5I1 949 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 BACH1O14867 736 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 CAND2O75155 1236 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 LARGE1O95461 756 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 STAT5BP51692 787 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 PLCB4Q15147 1175 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
ERCC1-213ENST00000592023 HERC6Q8IVU3 1022 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 BLIDQ8IZY5 108 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 ZBTB10Q96DT7 871 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
ERCC1-213ENST00000592023 DHX15O43143 795 aaKnown RBP17.24■□□□□ 0.35
ERCC1-213ENST00000592023 CA3P07451 260 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 INSRRP14616 1297 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 CIITAP33076 1130 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 TAF2Q6P1X5 1199 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 CCDC60Q8IWA6 550 aaPredicted RBP17.24■□□□□ 0.35
ERCC1-213ENST00000592023 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 DBF4BQ8NFT6 615 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 MAFAQ8NHW3 353 aaPredicted RBP17.24■□□□□ 0.35
ERCC1-213ENST00000592023 PHOSPHO2Q8TCD6 241 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 TBCKQ8TEA7 893 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 TRAPPC12Q8WVT3 735 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 LENG9Q96B70 501 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 OSBPL7Q9BZF2 842 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 MICAL3Q7RTP6 2002 aa17.24■□□□□ 0.35
ERCC1-213ENST00000592023 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 EDIL3O43854 480 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 ATG7O95352 703 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 CTDNEP1O95476 244 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 NEK4P51957 841 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 IKBKEQ14164 716 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 NPY5RQ15761 445 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 ME3Q16798 604 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 MARCH8Q5T0T0 291 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 FAM160B1Q5W0V3 765 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 ABHD15Q6UXT9 468 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 PLPPR4Q7Z2D5 763 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 FAM49AQ9H0Q0 323 aaPredicted RBP17.23■□□□□ 0.35
ERCC1-213ENST00000592023 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
ERCC1-213ENST00000592023 IGKV6D-21A0A0A0MT36 114 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 POTEB3A0JP26 581 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 MBLAC1A4D2B0 266 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-213ENST00000592023 RRN3P2A6NIE6 340 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 EFCAB14O75071 495 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 TDP2O95551 362 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 GALNT17Q6IS24 598 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 ZNF746Q6NUN9 644 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-213ENST00000592023 POTEBQ6S5H4 581 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 FAM177A1Q8N128 213 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-213ENST00000592023 SLC17A8Q8NDX2 589 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 DNAJB3Q8WWF6 145 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 GTF3C6Q969F1 213 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 GAS2L1Q99501 681 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-213ENST00000592023 ZNF302Q9NR11 478 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 GJB4Q9NTQ9 266 aa17.22■□□□□ 0.35
ERCC1-213ENST00000592023 ORC3Q9UBD5 711 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-213ENST00000592023 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 M0R2N6 131 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 MSH4O15457 936 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 TLL1O43897 1013 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 ARHGEF15O94989 841 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 GHRP10912 638 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 XBP1P17861 261 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 SLC26A2P50443 739 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 USP11P51784 963 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 KRT76Q01546 638 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERCC1-213ENST00000592023 C8orf34Q49A92 452 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 FAM26DQ5JW98 314 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERCC1-213ENST00000592023 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 RSPH3Q86UC2 560 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 SEPT8Q92599 483 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
ERCC1-213ENST00000592023 ZBED2Q9BTP6 218 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 PHF20Q9BVI0 1012 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
ERCC1-213ENST00000592023 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-213ENST00000592023 CHMP2AO43633 222 aa17.2■□□□□ 0.34
ERCC1-213ENST00000592023 CHRNA1P02708 482 aa17.2■□□□□ 0.34
ERCC1-213ENST00000592023 MGAT3Q09327 533 aa17.2■□□□□ 0.34
ERCC1-213ENST00000592023 INF2Q27J81 1249 aa17.2■□□□□ 0.34
ERCC1-213ENST00000592023 RPAINQ86UA6 219 aa17.2■□□□□ 0.34
ERCC1-213ENST00000592023 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms