RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ZNF215Q9UL58 517 aaPredicted RBP15.82■□□□□ 0.12
CLIP3-205ENST00000592017 IGLV3-22A0A075B6J6 115 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 ST18O60284 1047 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 BAIAP3O94812 1187 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 PARNO95453 639 aaKnown RBP15.81■□□□□ 0.12
CLIP3-205ENST00000592017 FDPSP14324 419 aaKnown RBP15.81■□□□□ 0.12
CLIP3-205ENST00000592017 MARK3P27448 753 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 ADAM17P78536 824 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 SETQ01105 290 aaPredicted RBP15.81■□□□□ 0.12
CLIP3-205ENST00000592017 ITGB3BPQ13352 177 aaPredicted RBP15.81■□□□□ 0.12
CLIP3-205ENST00000592017 NPY5RQ15761 445 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 GALNT17Q6IS24 598 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 TMCO2Q7Z6W1 182 aaPredicted RBP15.81■□□□□ 0.12
CLIP3-205ENST00000592017 HERC6Q8IVU3 1022 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 FAM177A1Q8N128 213 aaPredicted RBP15.81■□□□□ 0.12
CLIP3-205ENST00000592017 CRYGNQ8WXF5 182 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 SLC9A7Q96T83 725 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 ZNF577Q9BSK1 485 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 OSBPL7Q9BZF2 842 aa15.81■□□□□ 0.12
CLIP3-205ENST00000592017 NFASCO94856 1347 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 RSPH10B2B2RC85 870 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 ARHGEF15O94989 841 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 RSPH10BP0C881 870 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 WDR5P61964 334 aaKnown RBP15.8■□□□□ 0.12
CLIP3-205ENST00000592017 TRIM29Q14134 588 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 NONOQ15233 471 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLIP3-205ENST00000592017 CNKSR3Q6P9H4 555 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 KRT25Q7Z3Z0 450 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLIP3-205ENST00000592017 USP38Q8NB14 1042 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 LMBR1Q8WVP7 490 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 GLG1Q92896 1179 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 ZSCAN31Q96LW9 406 aaPredicted RBP15.8■□□□□ 0.12
CLIP3-205ENST00000592017 TBC1D32Q96NH3 1257 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 PCYT2Q99447 389 aa15.8■□□□□ 0.12
CLIP3-205ENST00000592017 CCDC194A0A1B0GVG4 234 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 M0R2N6 131 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 IPO5O00410 1097 aaKnown RBP15.79■□□□□ 0.12
CLIP3-205ENST00000592017 LGR5O75473 907 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 CA3P07451 260 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 GNAT1P11488 350 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 CIITAP33076 1130 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 ACTR2P61160 394 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 DEFB103AP81534 67 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 PPP2R2DQ66LE6 453 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 OXER1Q8TDS5 423 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
CLIP3-205ENST00000592017 TCEAL9Q9UHQ7 104 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 TET1Q8NFU7 2136 aa15.79■□□□□ 0.12
CLIP3-205ENST00000592017 SCN5AQ14524 2016 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 ABHD14A-ACY1A0A1B0GW23 586 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 DLL1O00548 723 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 TDP2O95551 362 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 KRT2P35908 639 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 KCNJ6P48051 423 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 INF2Q27J81 1249 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 RUFY4Q6ZNE9 571 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 PIK3AP1Q6ZUJ8 805 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 DBF4BQ8NFT6 615 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 AZI2Q9H6S1 392 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 ERAP1Q9NZ08 941 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 DOCK5Q9H7D0 1870 aa15.78■□□□□ 0.12
CLIP3-205ENST00000592017 EMSYQ7Z589 1322 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 NRCAMQ92823 1304 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 MYH7BA7E2Y1 1941 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 BACH1O14867 736 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 CCNE2O96020 404 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 CTSHP09668 335 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 USP11P51784 963 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 GUCY1B3Q02153 619 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 TAP1Q03518 808 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 PPFIA1Q13136 1202 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
CLIP3-205ENST00000592017 IKBKEQ14164 716 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 LETM2Q2VYF4 491 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 PLEKHG4Q58EX7 1191 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 MARCH8Q5T0T0 291 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.77■□□□□ 0.12
CLIP3-205ENST00000592017 LENG9Q96B70 501 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 GAS2L1Q99501 681 aaPredicted RBP15.77■□□□□ 0.12
CLIP3-205ENST00000592017 CERS4Q9HA82 394 aa15.77■□□□□ 0.12
CLIP3-205ENST00000592017 VCANP13611 3396 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 LCHNA4D1U4 455 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 EPOPA6NHQ4 379 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 KIF28PB7ZC32 967 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 RFXAPO00287 272 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 MSH4O15457 936 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 EDIL3O43854 480 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 TLL1O43897 1013 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 CAND2O75155 1236 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 IGFBP4P22692 258 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 NR5A1Q13285 461 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 GRIK4Q16099 956 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 FAM26DQ5JW98 314 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 KRT40Q6A162 431 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 SPRED2Q7Z698 418 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
CLIP3-205ENST00000592017 ZBTB10Q96DT7 871 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms