RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 BPNT1O95861 308 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 ESRRAP11474 423 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 HSD3B2P26439 372 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 BTDP43251 543 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 ZNF252P-AS1Q0IIN9 211 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 CCL15Q16663 113 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 ZNF423Q2M1K9 1284 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 DCAF15Q66K64 600 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 SPTY2D1Q68D10 685 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 GDF6Q6KF10 455 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 REC114Q7Z4M0 266 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 ERO1BQ86YB8 467 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 DZIP1Q86YF9 867 aaKnown RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 FAM43AQ8N2R8 423 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 RBBP8NLQ8NC74 664 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 NSUN4Q96CB9 384 aaKnown RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 HOOK2Q96ED9 719 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 UBL7Q96S82 380 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 ZNF341Q9BYN7 854 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 SOX17Q9H6I2 414 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 PCDHB5Q9Y5E4 795 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 CSADQ9Y600 493 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 DOCK1Q14185 1865 aa9.15□□□□□ -0.95
VMP1-213ENST00000591877 ATAD5Q96QE3 1844 aa9.15□□□□□ -0.95
VMP1-213ENST00000591877 ENPP3O14638 875 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 UQCRFS1P1P0C7P4 283 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 GTF2A2P52657 109 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 PPIL2Q13356 520 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 PKN2Q16513 984 aaKnown RBP9.14□□□□□ -0.95
VMP1-213ENST00000591877 GORABQ5T7V8 394 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 Q6ZS46 218 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 ZDHHC13Q8IUH4 622 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 HNRNPLLQ8WVV9 542 aaKnown RBP9.14□□□□□ -0.95
VMP1-213ENST00000591877 GAL3ST3Q96A11 431 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 EAF2Q96CJ1 260 aaPredicted RBP9.14□□□□□ -0.95
VMP1-213ENST00000591877 FERD3LQ96RJ6 166 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 CCDC8Q9H0W5 538 aaPredicted RBP9.14□□□□□ -0.95
VMP1-213ENST00000591877 DBNLQ9UJU6 430 aaKnown RBP9.14□□□□□ -0.95
VMP1-213ENST00000591877 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
VMP1-213ENST00000591877 HTTP42858 3142 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 BTBD19C9JJ37 291 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 CLSTN1O94985 981 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 SPINK2P20155 84 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 SOX10P56693 466 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 RPL6Q02878 288 aaKnown RBP9.13□□□□□ -0.95
VMP1-213ENST00000591877 PPATQ06203 517 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 OS9Q13438 667 aaPredicted RBP9.13□□□□□ -0.95
VMP1-213ENST00000591877 PICALMQ13492 652 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 MOGSQ13724 837 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 NOL9Q5SY16 702 aaKnown RBP9.13□□□□□ -0.95
VMP1-213ENST00000591877 RASIP1Q5U651 963 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 OTUD7BQ6GQQ9 843 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 FBXO46Q6PJ61 603 aaPredicted RBP9.13□□□□□ -0.95
VMP1-213ENST00000591877 OTOP1Q7RTM1 612 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 SIRT2Q8IXJ6 389 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 IL22RA1Q8N6P7 574 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 FBXO27Q8NI29 283 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 CD99L2Q8TCZ2 262 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 ZNF512BQ96KM6 892 aaPredicted RBP9.13□□□□□ -0.95
VMP1-213ENST00000591877 DEPDC7Q96QD5 511 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 SRPK1Q96SB4 655 aaKnown RBP9.13□□□□□ -0.95
VMP1-213ENST00000591877 CRBNQ96SW2 442 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 CCDC113Q9H0I3 377 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 SNTG2Q9NY99 539 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 EXOC6BQ9Y2D4 811 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 MSRB2Q9Y3D2 182 aa9.13□□□□□ -0.95
VMP1-213ENST00000591877 SMAD7O15105 426 aaKnown RBP9.12□□□□□ -0.95
VMP1-213ENST00000591877 TLR3O15455 904 aaKnown RBP9.12□□□□□ -0.95
VMP1-213ENST00000591877 LDHCP07864 332 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 CETPP11597 493 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 SP3Q02447 781 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 SNAPC2Q13487 334 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 SEPT6Q14141 434 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 IKBKEQ14164 716 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 CCDC158Q5M9N0 1113 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 TTC39AQ5SRH9 613 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 ADGRA1Q86SQ6 560 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
VMP1-213ENST00000591877 EHMT1Q9H9B1 1298 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 PIH1D3Q9NQM4 214 aaKnown RBP9.12□□□□□ -0.95
VMP1-213ENST00000591877 CACNA2D2Q9NY47 1150 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 RAI14Q9P0K7 980 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 LRP2BPQ9P2M1 347 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 TRIM17Q9Y577 477 aa9.12□□□□□ -0.95
VMP1-213ENST00000591877 MRPL42Q9Y6G3 142 aaKnown RBP9.12□□□□□ -0.95
VMP1-213ENST00000591877 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
VMP1-213ENST00000591877 ATE1O95260 518 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 CDC27P30260 824 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 GRIK1P39086 918 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 GSTO1P78417 241 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 C20orf194Q5TEA3 1177 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 CCDC81Q6ZN84 652 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 PDZD3Q86UT5 571 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 SH3RF3Q8TEJ3 882 aaPredicted RBP9.11□□□□□ -0.95
VMP1-213ENST00000591877 ERO1AQ96HE7 468 aa9.11□□□□□ -0.95
VMP1-213ENST00000591877 OSBPL5Q9H0X9 879 aaPredicted RBP9.11□□□□□ -0.95
VMP1-213ENST00000591877 ZBTB40Q9NUA8 1239 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms