RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 EIF3DO15371 548 aaKnown RBP eCLIP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 STAM2O75886 525 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 CCND2P30279 289 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 NSMFQ6X4W1 530 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 SLC30A10Q6XR72 485 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 EPM2AIP1Q7L775 607 aaPredicted RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 SFR1Q86XK3 245 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 REXO1L1PQ8IX06 675 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 ZNF397Q8NF99 534 aaPredicted RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 RDM1Q8NG50 284 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 KCTD10Q9H3F6 313 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 ZSWIM4Q9H7M6 989 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 ZNF214Q9UL59 606 aaPredicted RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 TRAF3IP3Q9Y228 551 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 PHLPP2Q6ZVD8 1323 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 CALUO43852 315 aaPredicted RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 FAM13AO94988 1023 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 TRIM21P19474 475 aaKnown RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 IREB2P48200 963 aaKnown RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 ETF1P62495 437 aaKnown RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 MRPS9P82933 396 aaKnown RBP28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 IL31RAQ8NI17 732 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 DNAJC7Q99615 494 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 LXNQ9BS40 222 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 ACAD9Q9H845 621 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 SNCAIPQ9Y6H5 919 aa28.83■■■□□ 2.21
RUNDC3A-206ENST00000590941 COL11A1P12107 1806 aaPredicted RBP28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 PDXKO00764 312 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 EIF2AK2P19525 551 aaKnown RBP28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 SFNP31947 248 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 NF2P35240 595 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 JAK3P52333 1124 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 SYCP1Q15431 976 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 KNOP1Q1ED39 458 aaKnown RBP28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 C1orf186Q6ZWK4 172 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 NLRX1Q86UT6 975 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 GPRASP2Q96D09 838 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 SYT17Q9BSW7 474 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 RUSC1Q9BVN2 902 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 FAM184BQ9ULE4 1060 aa28.82■■■□□ 2.2
RUNDC3A-206ENST00000590941 LOC285556D6RIA3 1793 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 CETN3O15182 167 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 LYPLA2O95372 231 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 GUCY2CP25092 1073 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 KRT76Q01546 638 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 CACNB1Q02641 598 aaPredicted RBP28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 PPP2R3AQ06190 1150 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 CCDC40Q4G0X9 1142 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 DPY19L2Q6NUT2 758 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 GLIS3Q8NEA6 775 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 NSUN6Q8TEA1 469 aaKnown RBP28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 ZNF592Q92610 1267 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 ZNHIT6Q9NWK9 470 aaKnown RBP28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 TBC1D7Q9P0N9 293 aa28.81■■■□□ 2.2
RUNDC3A-206ENST00000590941 TTC26A0AVF1 554 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 RIOK3O14730 519 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 DHX15O43143 795 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 ZBED6P86452 979 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 RAD51AP2Q09MP3 1159 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 BAATQ14032 418 aaPredicted RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 VGLL4Q14135 290 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 USP50Q70EL3 339 aaPredicted RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 ZC3H15Q8WU90 426 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 CDHR1Q96JP9 859 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 PCMTD1Q96MG8 357 aaPredicted RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 EDEM3Q9BZQ6 932 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 TTYH3Q9C0H2 523 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 PARVGQ9HBI0 331 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 DBR1Q9UK59 544 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 ARHGEF35A5YM69 484 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 RPL13P26373 211 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 CHST13Q8NET6 341 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 PIGOQ8TEQ8 1089 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 TIPINQ9BVW5 301 aa28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 MRPL44Q9H9J2 332 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 TYW1Q9NV66 732 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-206ENST00000590941 ZC3H4Q9UPT8 1303 aaKnown RBP28.79■■■□□ 2.2
RUNDC3A-206ENST00000590941 SOWAHDA6NJG2 315 aa28.79■■■□□ 2.2
RUNDC3A-206ENST00000590941 ZNF131P52739 623 aa28.79■■■□□ 2.2
RUNDC3A-206ENST00000590941 TMEM132BQ14DG7 1078 aa28.79■■■□□ 2.2
RUNDC3A-206ENST00000590941 L3MBTL3Q96JM7 780 aaPredicted RBP28.79■■■□□ 2.2
RUNDC3A-206ENST00000590941 SPDYE16A6NNV3 312 aaPredicted RBP28.78■■■□□ 2.2
RUNDC3A-206ENST00000590941 QARSP47897 775 aaKnown RBP28.78■■■□□ 2.2
RUNDC3A-206ENST00000590941 TOGARAM2Q6ZUX3 1019 aa28.78■■■□□ 2.2
RUNDC3A-206ENST00000590941 VSIG10LQ86VR7 867 aa28.78■■■□□ 2.2
RUNDC3A-206ENST00000590941 NELFCDQ8IXH7 590 aa28.78■■■□□ 2.2
RUNDC3A-206ENST00000590941 ADGRG1Q9Y653 693 aa28.78■■■□□ 2.2
RUNDC3A-206ENST00000590941 MYCLP12524 364 aaPredicted RBP28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 NFIL3Q16649 462 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 C9orf131Q5VYM1 1079 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 WNK4Q96J92 1243 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 FBXO40Q9UH90 709 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 FZD1Q9UP38 647 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 RIPK3Q9Y572 518 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 POLR2AP24928 1970 aaKnown RBP28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 WDR64B1ANS9 1081 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 DKC1O60832 514 aaKnown RBP eCLIP28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 PPATQ06203 517 aa28.77■■■□□ 2.2
RUNDC3A-206ENST00000590941 ITGB3BPQ13352 177 aaPredicted RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms