RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 CCDC140Q96MF4 163 aa9.53□□□□□ -0.88
NEDD4L-230ENST00000590638 HSPA12BQ96MM6 686 aa9.53□□□□□ -0.88
NEDD4L-230ENST00000590638 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
NEDD4L-230ENST00000590638 HDAC8Q9BY41 377 aa9.53□□□□□ -0.88
NEDD4L-230ENST00000590638 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
NEDD4L-230ENST00000590638 SBF2Q86WG5 1849 aa9.53□□□□□ -0.88
NEDD4L-230ENST00000590638 TJP1Q07157 1748 aa9.53□□□□□ -0.88
NEDD4L-230ENST00000590638 PALLDQ8WX93 1383 aa9.52□□□□□ -0.88
NEDD4L-230ENST00000590638 TMEM265A0A087WTH1 108 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 HMMRO75330 724 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 HOXC12P31275 282 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 GRIA2P42262 883 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 PIP4K2AP48426 406 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 PCBP3P57721 371 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 RSPO4Q2I0M5 234 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 FOXB2Q5VYV0 432 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 CEP85Q6P2H3 762 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 TSPYL5Q86VY4 417 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 KCTD13Q8WZ19 329 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 TCTN2Q96GX1 697 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 DUSP15Q9H1R2 295 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 C9orf78Q9NZ63 289 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 MRPS23Q9Y3D9 190 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 ST14Q9Y5Y6 855 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 BTAF1O14981 1849 aa9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-230ENST00000590638 NUP188Q5SRE5 1749 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 DYRK3O43781 588 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 ECI1P42126 302 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 NKPD1Q17RQ9 610 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 THAP5Q7Z6K1 395 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 SPACA3Q8IXA5 215 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 SIRT2Q8IXJ6 389 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 PLD6Q8N2A8 252 aaKnown RBP9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 EXOC2Q96KP1 924 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 MYD88Q99836 296 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 NKX2-4Q9H2Z4 354 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 DUSP13Q9UII6 198 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 U3KQE9 123 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 BRWD3Q6RI45 1802 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 UTYO14607 1347 aa9.51□□□□□ -0.89
NEDD4L-230ENST00000590638 LRP5O75197 1615 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 STXBP3O00186 592 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 GRM8O00222 908 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 CPP00450 1065 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 IGKV5-2P06315 115 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 SYPP08247 313 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 SRFP11831 508 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 FOSL1P15407 271 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 GYS2P54840 703 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 ATP8B2P98198 1209 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 NKAPLQ5M9Q1 402 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 KIF6Q6ZMV9 814 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 TTLL7Q6ZT98 887 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 KRT27Q7Z3Y8 459 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 KIAA0907Q7Z7F0 614 aaPredicted RBP9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 ZDHHC13Q8IUH4 622 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 DCTPP1Q9H773 170 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 CYP26B1Q9NR63 512 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 RNF112Q9ULX5 631 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 CD2APQ9Y5K6 639 aa9.5□□□□□ -0.89
NEDD4L-230ENST00000590638 RREB1Q92766 1687 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 COL5A3P25940 1745 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 PROCP04070 461 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 APPP05067 770 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 BMP8BP34820 402 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 CTSKP43235 329 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 SEPHS1P49903 392 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 GCKRQ14397 625 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 TKFCQ3LXA3 575 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 KSR1Q8IVT5 923 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 PRKAB1Q9Y478 270 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 SNX11Q9Y5W9 270 aa9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 LRRFIP2Q9Y608 721 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-230ENST00000590638 DNAJC25-GNG10A0A024R161 153 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 ERVV-1B6SEH8 477 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 GSTM1P09488 218 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 NBPF7P0C2Y1 421 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 HMGB2P26583 209 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 GRIK1P39086 918 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 CRKLP46109 303 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 GFRA1P56159 465 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 NUCB1Q02818 461 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 SCRN1Q12765 414 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 ITPK1Q13572 414 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 HSP90AB3PQ58FF7 597 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 INTS5Q6P9B9 1019 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 TMPRSS7Q7RTY8 843 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 CREG2Q8IUH2 290 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 CCDC191Q8NCU4 936 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 KISS1RQ969F8 398 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 OSBP2Q969R2 916 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 HRASLS5Q96KN8 279 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 TMX1Q9H3N1 280 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 ZC3H7BQ9UGR2 993 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 TCFL5Q9UL49 500 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 PLAGL2Q9UPG8 496 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms