RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 PLPPR4Q7Z2D5 763 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 SKAP1Q86WV1 359 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 DBF4BQ8NFT6 615 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 BICD2Q8TD16 824 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 PPM1EQ8WY54 764 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 ARNTL2Q8WYA1 636 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 TCEANC2Q96MN5 208 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 JAKMIP1Q96N16 626 aaKnown RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 SAMD11Q96NU1 681 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 ASB2Q96Q27 587 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 TGS1Q96RS0 853 aaKnown RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 ANO3Q9BYT9 981 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 SLC9A2Q9UBY0 812 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 TUBE1Q9UJT0 475 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 NAP1L2Q9ULW6 460 aaPredicted RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 COG5Q9UP83 839 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 SNX14Q9Y5W7 946 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 MTCH2Q9Y6C9 303 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 CDH23Q9H251 3354 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 CHD7Q9P2D1 2997 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 TRANK1O15050 2925 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 NEFLP07196 543 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 CYP3A4P08684 503 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 CDC27P30260 824 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 ADD1P35611 737 aaKnown RBP8.66□□□□□ -1.02
NPC1-208ENST00000590301 ZNF76P36508 570 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 EVCP57679 992 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 ACTR2P61160 394 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 ERVK-21P61565 698 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 HTRA4P83105 476 aaPredicted RBP8.66□□□□□ -1.02
NPC1-208ENST00000590301 GRIK4Q16099 956 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 Q6ZUG5 572 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 FAM177A1Q8N128 213 aaPredicted RBP8.66□□□□□ -1.02
NPC1-208ENST00000590301 REXO1Q8N1G1 1221 aaKnown RBP8.66□□□□□ -1.02
NPC1-208ENST00000590301 CCDC148Q8NFR7 591 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 BRF1Q92994 677 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 RNF26Q9BY78 433 aaPredicted RBP8.66□□□□□ -1.02
NPC1-208ENST00000590301 IFIH1Q9BYX4 1025 aaKnown RBP8.66□□□□□ -1.02
NPC1-208ENST00000590301 ZMYND12Q9H0C1 365 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 AGO4Q9HCK5 861 aaKnown RBP8.66□□□□□ -1.02
NPC1-208ENST00000590301 C6orf50Q9HD87 102 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 SQORQ9Y6N5 450 aa8.66□□□□□ -1.02
NPC1-208ENST00000590301 BDP1A6H8Y1 2624 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 LCHNA4D1U4 455 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 LINC01553A4QN01 128 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 PRPF3O43395 683 aaKnown RBP8.65□□□□□ -1.02
NPC1-208ENST00000590301 GABBR2O75899 941 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 ATG7O95352 703 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 CTSHP09668 335 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 IFNAR1P17181 557 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 MARK3P27448 753 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 SETQ01105 290 aaPredicted RBP8.65□□□□□ -1.02
NPC1-208ENST00000590301 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 GRB10Q13322 594 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 CCDC85BQ15834 202 aaPredicted RBP8.65□□□□□ -1.02
NPC1-208ENST00000590301 TCTN1Q2MV58 587 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 IER5Q5VY09 327 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 FAM160B1Q5W0V3 765 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 MYOCDQ8IZQ8 938 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 NME8Q8N427 588 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 CRYGNQ8WXF5 182 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 TOP1MTQ969P6 601 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 YME1L1Q96TA2 773 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 TM6SF1Q9BZW5 370 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 CERS4Q9HA82 394 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 TBC1D22BQ9NU19 505 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 PKD2L1Q9P0L9 805 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 TCEAL9Q9UHQ7 104 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 TRPC6Q9Y210 931 aa8.65□□□□□ -1.02
NPC1-208ENST00000590301 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.02
NPC1-208ENST00000590301 IGKV6D-21A0A0A0MT36 114 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 SMIM35A0A1B0GVV1 85 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 EPOPA6NHQ4 379 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 M0QZ92 97 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 IPO5O00410 1097 aaKnown RBP8.64□□□□□ -1.03
NPC1-208ENST00000590301 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 CHRNA1P02708 482 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 ARP10275 920 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 INSRRP14616 1297 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 STAT5BP51692 787 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 MRPS6P82932 125 aaKnown RBP8.64□□□□□ -1.03
NPC1-208ENST00000590301 MGAT3Q09327 533 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 ITGB3BPQ13352 177 aaPredicted RBP8.64□□□□□ -1.03
NPC1-208ENST00000590301 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
NPC1-208ENST00000590301 PTPROQ16827 1216 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 MARCH8Q5T0T0 291 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 ZNF746Q6NUN9 644 aaPredicted RBP8.64□□□□□ -1.03
NPC1-208ENST00000590301 MIS18BP1Q6P0N0 1132 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 CPLX2Q6PUV4 134 aaKnown RBP8.64□□□□□ -1.03
NPC1-208ENST00000590301 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.64□□□□□ -1.03
NPC1-208ENST00000590301 RUFY4Q6ZNE9 571 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 TSHZ1Q6ZSZ6 1077 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 PLA2G4DQ86XP0 818 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
NPC1-208ENST00000590301 TRIM22Q8IYM9 498 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 MICALL1Q8N3F8 863 aa8.64□□□□□ -1.03
NPC1-208ENST00000590301 CYP2W1Q8TAV3 490 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms