RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 NSUN7Q8NE18 718 aaKnown RBP24.28■■□□□ 1.48
LRP3-202ENST00000590275 TRAPPC12Q8WVT3 735 aa24.28■■□□□ 1.48
LRP3-202ENST00000590275 ERAP1Q9NZ08 941 aa24.28■■□□□ 1.48
LRP3-202ENST00000590275 MSH4O15457 936 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 ARHGEF15O94989 841 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 TDP2O95551 362 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 ATP4AP20648 1035 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 PPFIA1Q13136 1202 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 GRIN2CQ14957 1233 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 GRIK4Q16099 956 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 EARS2Q5JPH6 523 aaKnown RBP24.27■■□□□ 1.48
LRP3-202ENST00000590275 CCDC60Q8IWA6 550 aaPredicted RBP24.27■■□□□ 1.48
LRP3-202ENST00000590275 TIFAQ96CG3 184 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 CDX2Q99626 313 aaPredicted RBP24.27■■□□□ 1.48
LRP3-202ENST00000590275 ZNF577Q9BSK1 485 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 ORC3Q9UBD5 711 aaPredicted RBP24.27■■□□□ 1.48
LRP3-202ENST00000590275 SLC4A7Q9Y6M7 1214 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 NRCAMQ92823 1304 aa24.27■■□□□ 1.48
LRP3-202ENST00000590275 MBLAC1A4D2B0 266 aaPredicted RBP24.26■■□□□ 1.47
LRP3-202ENST00000590275 CTSHP09668 335 aa24.26■■□□□ 1.47
LRP3-202ENST00000590275 INSRRP14616 1297 aa24.26■■□□□ 1.47
LRP3-202ENST00000590275 MKRN4PQ13434 485 aaPredicted RBP24.26■■□□□ 1.47
LRP3-202ENST00000590275 FAM205CA6NFA0 338 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 RSPH10B2B2RC85 870 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 CDKL5O76039 1030 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 RSPH10BP0C881 870 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 STAT5BP51692 787 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 USP11P51784 963 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 IGBP1P78318 339 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 DEFB103AP81534 67 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 PLPPR4Q7Z2D5 763 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 NKX2-4Q9H2Z4 354 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 STXBP5LQ9Y2K9 1186 aa24.25■■□□□ 1.47
LRP3-202ENST00000590275 CHRNA1P02708 482 aa24.24■■□□□ 1.47
LRP3-202ENST00000590275 ATP2A2P16615 1042 aaKnown RBP24.24■■□□□ 1.47
LRP3-202ENST00000590275 WDR5P61964 334 aaKnown RBP24.24■■□□□ 1.47
LRP3-202ENST00000590275 SETQ01105 290 aaPredicted RBP24.24■■□□□ 1.47
LRP3-202ENST00000590275 MYLIPQ8WY64 445 aa24.24■■□□□ 1.47
LRP3-202ENST00000590275 MBOAT7Q96N66 472 aa24.24■■□□□ 1.47
LRP3-202ENST00000590275 ZNF576Q9H609 170 aa24.24■■□□□ 1.47
LRP3-202ENST00000590275 CYP3A7-CYP3A51PA0A087WV96 503 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 CYP3A7P24462 503 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 MGAT3Q09327 533 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 INF2Q27J81 1249 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 FAM26DQ5JW98 314 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 SWSAP1Q6NVH7 229 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 CNKSR3Q6P9H4 555 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 DBF4BQ8NFT6 615 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 SLC5A5Q92911 643 aa24.23■■□□□ 1.47
LRP3-202ENST00000590275 MTIF3Q9H2K0 278 aaKnown RBP24.23■■□□□ 1.47
LRP3-202ENST00000590275 ZBTB42B2RXF5 422 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 GNAT1P11488 350 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 GALNT17Q6IS24 598 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 SPRED2Q7Z698 418 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 DNAJB3Q8WWF6 145 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 TNFRSF25Q93038 417 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 C22orf23Q9BZE7 217 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 AZI2Q9H6S1 392 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 TBC1D22BQ9NU19 505 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 TUBE1Q9UJT0 475 aa24.22■■□□□ 1.47
LRP3-202ENST00000590275 TMEM265A0A087WTH1 108 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 SLC37A4O43826 429 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 ACTN1P12814 892 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 RBM25P49756 843 aaKnown RBP24.21■■□□□ 1.47
LRP3-202ENST00000590275 FOSBP53539 338 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 NR5A1Q13285 461 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 Q4G0T1 1027 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 PLEKHG4Q58EX7 1191 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 ZNF746Q6NUN9 644 aaPredicted RBP24.21■■□□□ 1.47
LRP3-202ENST00000590275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.21■■□□□ 1.47
LRP3-202ENST00000590275 RPAINQ86UA6 219 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 FAM177A1Q8N128 213 aaPredicted RBP24.21■■□□□ 1.47
LRP3-202ENST00000590275 UNC45AQ9H3U1 944 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 TRPC6Q9Y210 931 aa24.21■■□□□ 1.47
LRP3-202ENST00000590275 POTEB3A0JP26 581 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 EIF5BO60841 1220 aaKnown RBP24.2■■□□□ 1.46
LRP3-202ENST00000590275 PSMD10O75832 226 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 BAIAP3O94812 1187 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 PARNO95453 639 aaKnown RBP24.2■■□□□ 1.46
LRP3-202ENST00000590275 NONOQ15233 471 aaKnown RBP eCLIP24.2■■□□□ 1.46
LRP3-202ENST00000590275 UGCGQ16739 394 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 POTEBQ6S5H4 581 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 B3GNT9Q6UX72 402 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 HERC6Q8IVU3 1022 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 ETNPPLQ8TBG4 499 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 ZNF302Q9NR11 478 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 MAFBQ9Y5Q3 323 aaPredicted RBP24.2■■□□□ 1.46
LRP3-202ENST00000590275 PRUNE2Q8WUY3 3088 aa24.2■■□□□ 1.46
LRP3-202ENST00000590275 WNT7AO00755 349 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 BACH1O14867 736 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 ZNF862O60290 1169 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 CAND2O75155 1236 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 RAB30Q15771 203 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 MIS18BP1Q6P0N0 1132 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 PDXDC2PQ6P474 469 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 KRT25Q7Z3Z0 450 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 CCDC83Q8IWF9 413 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 LIMCH1Q9UPQ0 1083 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 PCDHA11Q9Y5I1 949 aa24.19■■□□□ 1.46
LRP3-202ENST00000590275 PTPRSQ13332 1948 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms