RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 RNPEPQ9H4A4 650 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 AZI2Q9H6S1 392 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 SUGCTQ9HAC7 445 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 C6orf50Q9HD87 102 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 JADE2Q9NQC1 790 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 SETD4Q9NVD3 440 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 UBIAD1Q9Y5Z9 338 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 CYP46A1Q9Y6A2 500 aa9.48□□□□□ -0.89
TPM4-211ENST00000589897 TET1Q8NFU7 2136 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 ABHD14A-ACY1A0A1B0GW23 586 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 C19orf67A6NJJ6 358 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 STXBP3O00186 592 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 CPLX1O14810 134 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 TREHO43280 583 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 EPB41L2O43491 1005 aaKnown RBP9.47□□□□□ -0.89
TPM4-211ENST00000589897 ATP9AO75110 1047 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 SCG2P13521 617 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 KCNA2P16389 499 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 MARK3P27448 753 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 GNA11P29992 359 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 ERVK-21P61565 698 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 RBL2Q08999 1139 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 PFKFB3Q16875 520 aaPredicted RBP9.47□□□□□ -0.89
TPM4-211ENST00000589897 HERC4Q5GLZ8 1057 aaPredicted RBP9.47□□□□□ -0.89
TPM4-211ENST00000589897 JAKMIP3Q5VZ66 844 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 RSPH3Q86UC2 560 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 SUGP1Q8IWZ8 645 aaKnown RBP9.47□□□□□ -0.89
TPM4-211ENST00000589897 TRIM22Q8IYM9 498 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 BICD2Q8TD16 824 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 NEK9Q8TD19 979 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 KCNB2Q92953 911 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 VWCEQ96DN2 955 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 PGBD1Q96JS3 809 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 CTAGE1Q96RT6 745 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 RAD9AQ99638 391 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 SMARCAD1Q9H4L7 1026 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 JPH1Q9HDC5 661 aaPredicted RBP9.47□□□□□ -0.89
TPM4-211ENST00000589897 KCNH7Q9NS40 1196 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 ERAP1Q9NZ08 941 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 SLC9A2Q9UBY0 812 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 TCEAL9Q9UHQ7 104 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 NRCAMQ92823 1304 aa9.47□□□□□ -0.89
TPM4-211ENST00000589897 BDP1A6H8Y1 2624 aa9.46□□□□□ -0.89
TPM4-211ENST00000589897 PRPF3O43395 683 aaKnown RBP9.46□□□□□ -0.9
TPM4-211ENST00000589897 NBNO60934 754 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 CAND2O75155 1236 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 LGR5O75473 907 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 CXCL10P02778 98 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 AMHP03971 560 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 CENPBP07199 599 aaPredicted RBP9.46□□□□□ -0.9
TPM4-211ENST00000589897 CTSHP09668 335 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 WDR5P61964 334 aaKnown RBP9.46□□□□□ -0.9
TPM4-211ENST00000589897 CCT2P78371 535 aaKnown RBP9.46□□□□□ -0.9
TPM4-211ENST00000589897 ZP2Q05996 745 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 FUT2Q10981 343 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 PPFIA1Q13136 1202 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 CEP55Q53EZ4 464 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 CPLX2Q6PUV4 134 aaKnown RBP9.46□□□□□ -0.9
TPM4-211ENST00000589897 RUFY3Q7L099 469 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
TPM4-211ENST00000589897 CCDC148Q8NFR7 591 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 GDPD5Q8WTR4 605 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 SEPT8Q92599 483 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 EDAQ92838 391 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 PHKBQ93100 1093 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 PBXIP1Q96AQ6 731 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 SLC26A6Q9BXS9 759 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 FAM217BQ9NTX9 383 aaPredicted RBP9.46□□□□□ -0.9
TPM4-211ENST00000589897 TMEM260Q9NX78 707 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 TRPC6Q9Y210 931 aa9.46□□□□□ -0.9
TPM4-211ENST00000589897 GSTTP1A0A1W2PQM5 241 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
TPM4-211ENST00000589897 BACH1O14867 736 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 SREBF1P36956 1147 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 IGBP1P78318 339 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 SSRP1Q08945 709 aaKnown RBP9.45□□□□□ -0.9
TPM4-211ENST00000589897 HIC1Q14526 733 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 GRIK4Q16099 956 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 TRIM71Q2Q1W2 868 aaKnown RBP9.45□□□□□ -0.9
TPM4-211ENST00000589897 IER5LQ5T953 404 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 ERICH6BQ5W0A0 696 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 FAM117BQ6P1L5 589 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 TAF2Q6P1X5 1199 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 PLA2G4DQ86XP0 818 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 MYOCDQ8IZQ8 938 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 DBF4BQ8NFT6 615 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 LMBR1Q8WVP7 490 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 WNT8BQ93098 351 aa9.45□□□□□ -0.9
TPM4-211ENST00000589897 MRPL38Q96DV4 380 aaKnown RBP9.45□□□□□ -0.9
TPM4-211ENST00000589897 RNF26Q9BY78 433 aaPredicted RBP9.45□□□□□ -0.9
TPM4-211ENST00000589897 ESYT2A0FGR8 921 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 RRN3P2A6NIE6 340 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 H3BQ06 376 aaPredicted RBP9.44□□□□□ -0.9
TPM4-211ENST00000589897 M0QZ92 97 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 MEIS1O00470 390 aa9.44□□□□□ -0.9
TPM4-211ENST00000589897 EIF5BO60841 1220 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms