RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, human

Gene TREM1, Length 1,876 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TREM1-206	ENST00000589882	ACTRT1	Q8TDG2	376 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	SCFD2	Q8WU76	684 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	MYH13	Q9UKX3	1938 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	ARHGAP23	Q9P227	1491 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	RBAK-RBAKDN	I3L0D1	243 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	ZNF189	O75820	626 aa	Predicted RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	TJP3	O95049	919 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	FGA	P02671	866 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	ZNF24	P17028	368 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PPP1R2	P41236	205 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	MAGEA10	P43363	369 aa	Predicted RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PPARD	Q03181	441 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	RCN2	Q14257	317 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	NAB2	Q15742	525 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	CNPY1	Q3B7I2	92 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	DENND2C	Q68D51	928 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PDXDC2P	Q6P474	469 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	BTNL9	Q6UXG8	535 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	CCDC80	Q76M96	950 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	LRRC43	Q8N309	656 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	KLHDC4	Q8TBB5	520 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	SEC14L1	Q92503	715 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	GRAMD1A	Q96CP6	724 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	HIC2	Q96JB3	615 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	MPHOSPH6	Q99547	160 aa	Known RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	SPATA16	Q9BXB7	569 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PPP1R12C	Q9BZL4	782 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	EDEM3	Q9BZQ6	932 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	ADAM7	Q9H2U9	754 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	AIPL1	Q9NZN9	384 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	KLHL14	Q9P2G3	628 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	SUN2	Q9UH99	717 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	UTP11	Q9Y3A2	253 aa	Known RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	CD2AP	Q9Y5K6	639 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	NWD2	Q9ULI1	1742 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PGRMC1	O00264	195 aa	Known RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	ECE2	O60344	883 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PALM	O75781	387 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	DEXI	O95424	95 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	IDO1	P14902	403 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	MTIF2	P46199	727 aa	Known RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	RFX5	P48382	616 aa	Predicted RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PTPN12	Q05209	780 aa	Known RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	ACVR2B	Q13705	512 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	NEK9	Q8TD19	979 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	LRRC8C	Q8TDW0	803 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PPP2R3C	Q969Q6	453 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	TMEM109	Q9BVC6	243 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	BLZF1	Q9H2G9	400 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	PCDH18	Q9HCL0	1135 aa		12.8	□□□□□ -0.36
TREM1-206	ENST00000589882	MYH7B	A7E2Y1	1941 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	MBD4	O95243	580 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	ANXA1	P04083	346 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	SHBG	P04278	402 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	PLEK	P08567	350 aa	Predicted RBP	12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	XBP1	P17861	261 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	RASSF7	Q02833	373 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	SULT2A1	Q06520	285 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	CBX3	Q13185	183 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	RPS6KA1	Q15418	735 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	CCDC6	Q16204	474 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	CNGA2	Q16280	664 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	KBTBD12	Q3ZCT8	623 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	USH1G	Q495M9	461 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	SFMBT2	Q5VUG0	894 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	INTS8	Q75QN2	995 aa	Known RBP	12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	CCDC84	Q86UT8	332 aa	Predicted RBP	12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	CSGALNACT2	Q8N6G5	542 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	PPFIBP2	Q8ND30	876 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	IRGQ	Q8WZA9	623 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	MAML3	Q96JK9	1138 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	FMO2	Q99518	471 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	TXLNGY	Q9BZA5	131 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	OCEL1	Q9H607	264 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	NMRK1	Q9NWW6	199 aa		12.79	□□□□□ -0.36
TREM1-206	ENST00000589882	BUB1	O43683	1085 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	ATP9A	O75110	1047 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	LIFR	P42702	1097 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	USP46	P62068	366 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	UCMA	Q8WVF2	138 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	OSBP2	Q969R2	916 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	LENG1	Q96BZ8	264 aa	Predicted RBP	12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	AGAP3	Q96P47	875 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	CATSPER2	Q96P56	530 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	SMC6	Q96SB8	1091 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	DDX23	Q9BUQ8	820 aa	Known RBP	12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	NOC4L	Q9BVI4	516 aa	Known RBP	12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	UBA5	Q9GZZ9	404 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	ZMYND12	Q9H0C1	365 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	NEUROG2	Q9H2A3	272 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	PABPC3	Q9H361	631 aa	Known RBP	12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	CABP5	Q9NP86	173 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	PRKAG3	Q9UGI9	489 aa		12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	CNOT7	Q9UIV1	285 aa	Known RBP	12.78	□□□□□ -0.36
TREM1-206	ENST00000589882	PNMA3	Q9UL41	463 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms