RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 IFIH1Q9BYX4 1025 aaKnown RBP16.38■□□□□ 0.21
MBD1-220ENST00000589758 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
MBD1-220ENST00000589758 COG5Q9UP83 839 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 ESYT2A0FGR8 921 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 MEIS1O00470 390 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 EPB41L2O43491 1005 aaKnown RBP16.37■□□□□ 0.21
MBD1-220ENST00000589758 LPXNO60711 386 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 CHRNA1P02708 482 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 ARP10275 920 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 SCG2P13521 617 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 CPA1P15085 419 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 RPS6KB1P23443 525 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 SPRED2Q7Z698 418 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 SAMD11Q96NU1 681 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 SUGCTQ9HAC7 445 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 C6orf50Q9HD87 102 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 NID2Q14112 1375 aa16.37■□□□□ 0.21
MBD1-220ENST00000589758 TNFRSF10AO00220 468 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
MBD1-220ENST00000589758 INSRRP14616 1297 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 SLC26A2P50443 739 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 STAT5BP51692 787 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 ACTR2P61160 394 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
MBD1-220ENST00000589758 MARCH8Q5T0T0 291 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 RUFY4Q6ZNE9 571 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
MBD1-220ENST00000589758 DNAJB3Q8WWF6 145 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 PCYT2Q99447 389 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 OSBPL7Q9BZF2 842 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 ZMYND12Q9H0C1 365 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 MTUS1Q9ULD2 1270 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 CHD9Q3L8U1 2897 aa16.36■□□□□ 0.21
MBD1-220ENST00000589758 SIP14410 1827 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.35■□□□□ 0.21
MBD1-220ENST00000589758 UPP2O95045 317 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 ATG7O95352 703 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 CYP3A4P08684 503 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 GNA11P29992 359 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 IGBP1P78318 339 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 MGAT3Q09327 533 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 JAKMIP3Q5VZ66 844 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 KRT40Q6A162 431 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 ADAMTS19Q8TE59 1207 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 GDPD5Q8WTR4 605 aa16.35■□□□□ 0.21
MBD1-220ENST00000589758 PRUNE2Q8WUY3 3088 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 PRRC2BQ5JSZ5 2229 aaKnown RBP16.34■□□□□ 0.21
MBD1-220ENST00000589758 COL4A4P53420 1690 aaPredicted RBP16.34■□□□□ 0.21
MBD1-220ENST00000589758 GHRP10912 638 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
MBD1-220ENST00000589758 PLCB4Q15147 1175 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 IER5Q5VY09 327 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 FAM160B1Q5W0V3 765 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
MBD1-220ENST00000589758 FBXO22Q8NEZ5 403 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 UHRF1Q96T88 793 aaPredicted RBP16.34■□□□□ 0.21
MBD1-220ENST00000589758 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
MBD1-220ENST00000589758 CDY2AQ9Y6F7 541 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 SQORQ9Y6N5 450 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
MBD1-220ENST00000589758 IGKV6D-21A0A0A0MT36 114 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 POTEB3A0JP26 581 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 M0QZ92 97 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 BMP1P13497 986 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 MRPS6P82932 125 aaKnown RBP16.33■□□□□ 0.2
MBD1-220ENST00000589758 SETQ01105 290 aaPredicted RBP16.33■□□□□ 0.2
MBD1-220ENST00000589758 TFF2Q03403 129 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 LPIN1Q14693 890 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 PKN1Q16512 942 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 FBXO47Q5MNV8 452 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 POTEBQ6S5H4 581 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 TSHZ1Q6ZSZ6 1077 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 CRYGNQ8WXF5 182 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 HLA-CQ95604 372 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 C17orf80Q9BSJ5 609 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 PCDHA2Q9Y5H9 948 aa16.33■□□□□ 0.2
MBD1-220ENST00000589758 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 FAM86B1E9PN63 330 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 IPO5O00410 1097 aaKnown RBP16.32■□□□□ 0.2
MBD1-220ENST00000589758 HBP1O60381 514 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 FAM86B2P0C5J1 330 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 EVCP57679 992 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 NTRK3Q16288 839 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 PTPROQ16827 1216 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 MIS18BP1Q6P0N0 1132 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 ABHD15Q6UXT9 468 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 RUFY3Q7L099 469 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 NME8Q8N427 588 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
MBD1-220ENST00000589758 TBC1D22BQ9NU19 505 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 CHD7Q9P2D1 2997 aa16.32■□□□□ 0.2
MBD1-220ENST00000589758 VCANP13611 3396 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms