RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 UTP4Q969X6 686 aaKnown RBP6.93□□□□□ -1.3
SMAD4-208ENST00000589706 Q96M66 194 aa6.93□□□□□ -1.3
SMAD4-208ENST00000589706 TCEAL9Q9UHQ7 104 aa6.93□□□□□ -1.3
SMAD4-208ENST00000589706 PALLDQ8WX93 1383 aa6.93□□□□□ -1.3
SMAD4-208ENST00000589706 UQCRHLA0A096LP55 91 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 MEIS1O00470 390 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 AQP7O14520 342 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 LEFTY1O75610 366 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 CRTAMO95727 393 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 GSNP06396 782 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 UQCRHP07919 91 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 KIR3DL1P43629 444 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 TMF1P82094 1093 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 RASSF7Q02833 373 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 GABPB1Q06547 395 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-208ENST00000589706 SCRN1Q12765 414 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 NMIQ13287 307 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-208ENST00000589706 SEPT7Q16181 437 aaKnown RBP6.92□□□□□ -1.3
SMAD4-208ENST00000589706 RNF219Q5W0B1 726 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-208ENST00000589706 CDCA2Q69YH5 1023 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-208ENST00000589706 DENND5AQ6IQ26 1287 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 STYK1Q6J9G0 422 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 CTR9Q6PD62 1173 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 PODNQ7Z5L7 613 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 NECAB2Q7Z6G3 386 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 MYRFLQ96LU7 910 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 POLR3GLQ9BT43 218 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 PRDM5Q9NQX1 630 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-208ENST00000589706 KCNG1Q9UIX4 513 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 MINPP1Q9UNW1 487 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 KIF3AQ9Y496 699 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 PCDHA9Q9Y5H5 950 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 PASKQ96RG2 1323 aa6.92□□□□□ -1.3
SMAD4-208ENST00000589706 IBTKQ9P2D0 1353 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-208ENST00000589706 CBX7O95931 251 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 TTF1Q15361 905 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-208ENST00000589706 DEFB115Q30KQ5 88 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 CWF19L1Q69YN2 538 aaKnown RBP6.91□□□□□ -1.3
SMAD4-208ENST00000589706 PAOXQ6QHF9 649 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 KCNT2Q6UVM3 1135 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 FAM20CQ8IXL6 584 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 RAVER1Q8IY67 606 aaKnown RBP6.91□□□□□ -1.3
SMAD4-208ENST00000589706 DZIP1LQ8IYY4 767 aaKnown RBP6.91□□□□□ -1.3
SMAD4-208ENST00000589706 ARMC10Q8N2F6 343 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 BEND7Q8N7W2 519 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-208ENST00000589706 LINC00116Q8NCU8 138 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 COPS5Q92905 334 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 MCMBPQ9BTE3 642 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 MCOLN1Q9GZU1 580 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 SLC5A4Q9NY91 659 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 RNF112Q9ULX5 631 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 TTC21AQ8NDW8 1320 aa6.91□□□□□ -1.3
SMAD4-208ENST00000589706 KDM6AO15550 1401 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-208ENST00000589706 AURKAO14965 403 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 GPR39O43194 453 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 BRINP1O60477 761 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 KATNA1O75449 491 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 CD3EP07766 207 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 FAM87AP0C7U9 286 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 NAT1P18440 290 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 CHRNA5P30532 468 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 CTSKP43235 329 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 EPHB1P54762 984 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 HMGN5P82970 282 aaKnown RBP6.9□□□□□ -1.3
SMAD4-208ENST00000589706 GUCY1A3Q02108 690 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 STAT4Q14765 748 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 ZCCHC8Q6NZY4 707 aaKnown RBP6.9□□□□□ -1.3
SMAD4-208ENST00000589706 LHFPL2Q6ZUX7 228 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 ENOX1Q8TC92 643 aaKnown RBP6.9□□□□□ -1.3
SMAD4-208ENST00000589706 USP7Q93009 1102 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 LTV1Q96GA3 475 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-208ENST00000589706 WNK4Q96J92 1243 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 TIGD1Q96MW7 591 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 KCNF1Q9H3M0 494 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 ST14Q9Y5Y6 855 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 CNTNAP5Q8WYK1 1306 aa6.9□□□□□ -1.3
SMAD4-208ENST00000589706 WDR33Q9C0J8 1336 aaKnown RBP6.9□□□□□ -1.3
SMAD4-208ENST00000589706 SHISA3A0PJX4 238 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 C2orf71A6NGG8 1288 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 RASSF10A6NK89 507 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 STXBP3O00186 592 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 TULP2O00295 520 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 THBDP07204 575 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
SMAD4-208ENST00000589706 SCNN1BP51168 640 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 ADGRE1Q14246 886 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 CLEC16AQ2KHT3 1053 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 SKOR2Q2VWA4 1001 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-208ENST00000589706 ACBD5Q5T8D3 534 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-208ENST00000589706 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-208ENST00000589706 PIK3R6Q5UE93 754 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 CRTC3Q6UUV7 619 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 RSPO2Q6UXX9 243 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-208ENST00000589706 PPIL6Q8IXY8 311 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 OR2W6PQ8NHA6 318 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 NPLOC4Q8TAT6 608 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 FRS2Q8WU20 508 aa6.89□□□□□ -1.31
SMAD4-208ENST00000589706 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms