RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ADAM7Q9H2U9 754 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 PARD6AQ9NPB6 346 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 AAASQ9NRG9 546 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 SETD4Q9NVD3 440 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 DUSP12Q9UNI6 340 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 MTMR7Q9Y216 660 aa7.17□□□□□ -1.26
VPS25-204ENST00000589577 HELZ2Q9BYK8 2649 aaKnown RBP7.17□□□□□ -1.26
VPS25-204ENST00000589577 FREM2Q5SZK8 3169 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 H3BRB1 525 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 NARSO43776 548 aaKnown RBP7.16□□□□□ -1.26
VPS25-204ENST00000589577 SRGAP2BP0DMP2 458 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 SP2Q02086 613 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 LMNB2Q03252 620 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 ITIH3Q06033 890 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 CCDC96Q2M329 555 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 FBXO47Q5MNV8 452 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 VARS2Q5ST30 1063 aaKnown RBP7.16□□□□□ -1.26
VPS25-204ENST00000589577 PLPP4Q5VZY2 271 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 RUFY4Q6ZNE9 571 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 NPAS4Q8IUM7 802 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 TMEM57Q8N5G2 664 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 SYTL5Q8TDW5 730 aaPredicted RBP7.16□□□□□ -1.26
VPS25-204ENST00000589577 LMBR1Q8WVP7 490 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 CLUAP1Q96AJ1 413 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 SPATA33Q96N06 139 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 NECTIN4Q96NY8 510 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS25-204ENST00000589577 BOLA2Q9H3K6 86 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 TUT1Q9H6E5 874 aaKnown RBP7.16□□□□□ -1.26
VPS25-204ENST00000589577 BCAS3Q9H6U6 928 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 AGO3Q9H9G7 860 aaKnown RBP7.16□□□□□ -1.26
VPS25-204ENST00000589577 STX8Q9UNK0 236 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 HCFC2Q9Y5Z7 792 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 FRMPD2Q68DX3 1309 aaPredicted RBP7.16□□□□□ -1.26
VPS25-204ENST00000589577 WDR19Q8NEZ3 1342 aa7.16□□□□□ -1.26
VPS25-204ENST00000589577 LAMA4Q16363 1823 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 PRR5-ARHGAP8B1AHC4 643 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 B4DLN1 442 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 GGPS1O95749 300 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 EOMESO95936 686 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 LGALS2P05162 132 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 DCNP07585 359 aaKnown RBP7.15□□□□□ -1.26
VPS25-204ENST00000589577 GLULP15104 373 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 UBA1P22314 1058 aaKnown RBP7.15□□□□□ -1.26
VPS25-204ENST00000589577 MRPL12P52815 198 aaKnown RBP7.15□□□□□ -1.26
VPS25-204ENST00000589577 ARHGAP8P85298 464 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 TDGQ13569 410 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 STXBP2Q15833 593 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 SPECC1Q5M775 1068 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 CELF3Q5SZQ8 465 aaKnown RBP7.15□□□□□ -1.26
VPS25-204ENST00000589577 KIAA1841Q6NSI8 718 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 RGS22Q8NE09 1264 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 RHPN1Q8TCX5 695 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 NSUN6Q8TEA1 469 aaKnown RBP7.15□□□□□ -1.26
VPS25-204ENST00000589577 DCAF4Q8WV16 495 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 GPKOWQ92917 476 aaPredicted RBP eCLIP7.15□□□□□ -1.26
VPS25-204ENST00000589577 OSBP2Q969R2 916 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 TMEM260Q9NX78 707 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 NCDNQ9UBB6 729 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 USTQ9Y2C2 406 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.15□□□□□ -1.26
VPS25-204ENST00000589577 TELO2Q9Y4R8 837 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 MRVI1Q9Y6F6 885 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 IGSF10Q6WRI0 2623 aa7.15□□□□□ -1.26
VPS25-204ENST00000589577 LAMA5O15230 3695 aa7.15□□□□□ -1.27
VPS25-204ENST00000589577 KINO60870 393 aaKnown RBP7.14□□□□□ -1.27
VPS25-204ENST00000589577 EIF3JO75822 258 aaKnown RBP7.14□□□□□ -1.27
VPS25-204ENST00000589577 CFHP08603 1231 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 ATP5JP18859 108 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 EIF2AK2P19525 551 aaKnown RBP7.14□□□□□ -1.27
VPS25-204ENST00000589577 PMLP29590 882 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 CD52P31358 61 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 MTHFRP42898 656 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 TDO2P48775 406 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 DMWDQ09019 674 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 TBC1D8BQ0IIM8 1120 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 USH1GQ495M9 461 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 TPRNQ4KMQ1 711 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 PDE12Q6L8Q7 609 aaKnown RBP7.14□□□□□ -1.27
VPS25-204ENST00000589577 CES5AQ6NT32 575 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 CEP85Q6P2H3 762 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 TSHZ1Q6ZSZ6 1077 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 ERC1Q8IUD2 1116 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 C1orf210Q8IVY1 113 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 ITPRIPQ8IWB1 547 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 PLCD3Q8N3E9 789 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 GPR161Q8N6U8 529 aaKnown RBP7.14□□□□□ -1.27
VPS25-204ENST00000589577 C12orf76Q8N812 135 aaPredicted RBP7.14□□□□□ -1.27
VPS25-204ENST00000589577 COLGALT1Q8NBJ5 622 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 CASP10Q92851 521 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 IWS1Q96ST2 819 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 RMDN3Q96TC7 470 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 TCF25Q9BQ70 676 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 TBC1D17Q9HA65 648 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 KCNK12Q9HB15 430 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 ZNF287Q9HBT7 754 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 GPCPD1Q9NPB8 672 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 CYP26B1Q9NR63 512 aa7.14□□□□□ -1.27
VPS25-204ENST00000589577 FBXL21Q9UKT6 434 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms