RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 IPPKQ9H8X2 491 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 PPLO60437 1756 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 JCADQ9P266 1359 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 TCRBV5S4A2TA0A5A2 114 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 ASMTLO95671 621 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 THBS2P35442 1172 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 GRB10Q13322 594 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 WDR43Q15061 677 aaKnown RBP eCLIP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 WWC2Q6AWC2 1192 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 MILR1Q7Z6M3 343 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 ST13P5Q8NFI4 369 aaPredicted RBP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 PIP4K2CQ8TBX8 421 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 TNFRSF12AQ9NP84 129 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 SIRPGQ9P1W8 387 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 DBR1Q9UK59 544 aaKnown RBP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 TELO2Q9Y4R8 837 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 GPRASP1Q5JY77 1395 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 ABCC11Q96J66 1382 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 CGNL1Q0VF96 1302 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 TRBV23-1A0A0A0MS06 115 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 MEFVO15553 781 aaPredicted RBP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 SGSM2O43147 1006 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 C1QTNF9P0C862 333 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 KRT15P19012 456 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 HSP90AA2PQ14568 343 aaPredicted RBP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 PLEKHN1Q494U1 663 aaPredicted RBP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 HLA-DQA1Q5Y7H0 255 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 SYDE1Q6ZW31 735 aaPredicted RBP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 KCTD13Q8WZ19 329 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 KCNN1Q92952 543 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 LRRC59Q96AG4 307 aaKnown RBP4.26□□□□□ -1.73
ZNF540-207ENST00000589285 GCM1Q9NP62 436 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 PDLIM7Q9NR12 457 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 TNFRSF10DQ9UBN6 386 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 WASF3Q9UPY6 502 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 IFT172Q9UG01 1749 aa4.26□□□□□ -1.73
ZNF540-207ENST00000589285 SPATA31A6Q5VVP1 1343 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 TRAV20A0A0B4J274 112 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.25□□□□□ -1.73
ZNF540-207ENST00000589285 A0A1W2PQ45 241 aaPredicted RBP4.25□□□□□ -1.73
ZNF540-207ENST00000589285 A0A1W2PQY0 241 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 TCERG1O14776 1098 aaKnown RBP4.25□□□□□ -1.73
ZNF540-207ENST00000589285 SDSP20132 328 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 PPP2R1AP30153 589 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 GUCY1A3Q02108 690 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 MESP2Q0VG99 397 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 BRAPQ7Z569 592 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 TMEM169Q96HH4 297 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 MTA3Q9BTC8 594 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 THUMPD2Q9BTF0 503 aaKnown RBP4.25□□□□□ -1.73
ZNF540-207ENST00000589285 ADGRB1O14514 1584 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 MYOM2P54296 1465 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 ELL2O00472 640 aaPredicted RBP4.25□□□□□ -1.73
ZNF540-207ENST00000589285 ZNF772Q68DY9 489 aaPredicted RBP4.25□□□□□ -1.73
ZNF540-207ENST00000589285 BRINP3Q76B58 766 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 OSTM1Q86WC4 334 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 MST1RQ04912 1400 aa4.25□□□□□ -1.73
ZNF540-207ENST00000589285 LCHNA4D1U4 455 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 PYGMP11217 842 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 HOXC12P31275 282 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 LTBRP36941 435 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 DCTN1Q14203 1278 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 MTDHQ86UE4 582 aaKnown RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 TRMT2BQ96GJ1 504 aaKnown RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 CNTD2Q9H8S5 307 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 PALD1Q9ULE6 856 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 CBLCQ9ULV8 474 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 NRXN3Q9Y4C0 1643 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 ARID1BQ8NFD5 2236 aaPredicted RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 TTC21BQ7Z4L5 1316 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 TULP4Q9NRJ4 1543 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 ROBO1Q9Y6N7 1651 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 APAF1O14727 1248 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 GLI4P10075 376 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 ATF2P15336 505 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 DNM2P50570 870 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 RTP5Q14D33 572 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 SEC23AQ15436 765 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 MEX3CQ5U5Q3 659 aaKnown RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 ZNF662Q6ZS27 426 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 DDX11Q96FC9 970 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 ASIC4Q96FT7 647 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 FAM126AQ9BYI3 521 aaPredicted RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 CCDC113Q9H0I3 377 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 MS4A5Q9H3V2 200 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 KIF1AQ12756 1690 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 OR14I1A6ND48 311 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 PDE6AP16499 860 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 PMLP29590 882 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 KIR2DL1P43626 348 aaPredicted RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 KIR2DL2P43627 348 aaPredicted RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 ATG14Q6ZNE5 492 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 LRRC47Q8N1G4 583 aaKnown RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 KISS1RQ969F8 398 aaPredicted RBP4.24□□□□□ -1.73
ZNF540-207ENST00000589285 NOX5Q96PH1 765 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 IRF2BPLQ9H1B7 796 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 EPB41L4BQ9H329 900 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 PRDM11Q9NQV5 511 aa4.24□□□□□ -1.73
ZNF540-207ENST00000589285 PHLPP1O60346 1717 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 SLC27A2O14975 620 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms