RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 HYIQ5T013 277 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 STRIP1Q5VSL9 837 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 APOBEC3HQ6NTF7 200 aaKnown RBP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 WDR59Q6PJI9 974 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 BRICD5Q6PL45 260 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 TMEM179Q6ZVK1 233 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 KCTD1Q719H9 257 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 MSL3Q8N5Y2 521 aaKnown RBP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 MSANTD4Q8NCY6 345 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 CEP63Q96MT8 703 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 PNMA5Q96PV4 448 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 ALS2CR12Q96Q35 445 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 PURBQ96QR8 312 aaKnown RBP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 AMNQ9BXJ7 453 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 TANGO6Q9C0B7 1094 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 DDX4Q9NQI0 724 aaKnown RBP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 PANK4Q9NVE7 773 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 RAB21Q9UL25 225 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 VPS9D1Q9Y2B5 631 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 CYP3A7-CYP3A51PA0A087WV96 503 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 SPDYE3A6NKU9 549 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 TBX3O15119 743 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 AKR1B10O60218 316 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 SSBP05455 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 CYP3A7P24462 503 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 EPS15P42566 896 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 VAV2P52735 878 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 UBE2SQ16763 222 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 CCDC40Q4G0X9 1142 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 HSP90B2PQ58FF3 399 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 FAM26FQ5R3K3 315 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 SLFN13Q68D06 897 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 SLC51AQ86UW1 340 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 CERS5Q8N5B7 392 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 SECISBP2LQ93073 1101 aaKnown RBP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 THAP11Q96EK4 314 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 EEF2KMTQ96G04 330 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 IDI2Q9BXS1 227 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 IFIH1Q9BYX4 1025 aaKnown RBP8.18□□□□□ -1.1
ZNF540-206ENST00000589117 FAM184BQ9ULE4 1060 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 JRKLQ9Y4A0 524 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 COL4A3BPQ9Y5P4 624 aa8.18□□□□□ -1.1
ZNF540-206ENST00000589117 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 TRAF5O00463 557 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 TBC1D8O95759 1140 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 SLC16A2P36021 539 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 IKQ13123 557 aaPredicted RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 PAPD7Q5XG87 772 aaKnown RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 TTBK2Q6IQ55 1244 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 TRAPPC11Q7Z392 1133 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 C2CD5Q86YS7 1000 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 CAGE1Q8TC20 777 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 LRRC15Q8TF66 581 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 ZNF622Q969S3 477 aaKnown RBP eCLIP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 FAM20AQ96MK3 541 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 JADE2Q9NQC1 790 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 PRDM9Q9NQV7 894 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 SYNPO2Q9UMS6 1093 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 DNM3Q9UQ16 869 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 PITPNM2Q9BZ72 1349 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 CDK5RAP2Q96SN8 1893 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 SFI1A8K8P3 1242 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 H0YIN7 160 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 SEC31AO94979 1220 aaKnown RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 RECKO95980 971 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 EEF2P13639 858 aaKnown RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 ICA1Q05084 483 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 HERC4Q5GLZ8 1057 aaPredicted RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 WDR93Q6P2C0 686 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 ADAM32Q8TC27 787 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 SYN2Q92777 582 aaPredicted RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 HAS1Q92839 578 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 MKNK1Q9BUB5 465 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 FUT8Q9BYC5 575 aa8.17□□□□□ -1.1
ZNF540-206ENST00000589117 FAM207AQ9NSI2 230 aaPredicted RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 DNAAF2Q9NVR5 837 aaKnown RBP8.17□□□□□ -1.1
ZNF540-206ENST00000589117 A0A0U1RQJ8 604 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 TARSL2A2RTX5 802 aaKnown RBP8.16□□□□□ -1.1
ZNF540-206ENST00000589117 CETN3O15182 167 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 RHOXF2BP0C7M4 288 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 PLA2G4BP0C869 781 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 PRLRP16471 622 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 ERCC3P19447 782 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 HERVK_113P62684 666 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 AMPD2Q01433 879 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 EHHADHQ08426 723 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 COASYQ13057 564 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 CDC37Q16543 378 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-206ENST00000589117 QRICH1Q2TAL8 776 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 Q3C1V9 767 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 SLC9C1Q4G0N8 1177 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 RRAGAQ7L523 313 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 FBXO11Q86XK2 927 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 SCUBE3Q8IX30 993 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 GMCL1P1Q8NEA9 526 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 ATRIPQ8WXE1 791 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 GMCL1Q96IK5 515 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms