RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 PPFIA1Q13136 1202 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 GRIK4Q16099 956 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 TSHZ1Q6ZSZ6 1077 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 RBM23Q86U06 439 aaKnown RBP17.62■□□□□ 0.41
IFT20-216ENST00000588477 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 SUGP1Q8IWZ8 645 aaKnown RBP17.62■□□□□ 0.41
IFT20-216ENST00000588477 KLHL23Q8NBE8 558 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 SMARCC2Q8TAQ2 1214 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 LINC01599Q8WXQ3 324 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 TUBE1Q9UJT0 475 aa17.62■□□□□ 0.41
IFT20-216ENST00000588477 MYO10Q9HD67 2058 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 CD52P31358 61 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 NRIP1P48552 1158 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 PKN1Q16512 942 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 PAN2Q504Q3 1202 aaKnown RBP17.61■□□□□ 0.41
IFT20-216ENST00000588477 NAALADL2Q58DX5 795 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 PCNX4Q63HM2 1172 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 RTN4RL1Q86UN2 441 aaPredicted RBP17.61■□□□□ 0.41
IFT20-216ENST00000588477 NLRX1Q86UT6 975 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 CMTR2Q8IYT2 770 aaKnown RBP17.61■□□□□ 0.41
IFT20-216ENST00000588477 EFHBQ8N7U6 833 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 GIMAP8Q8ND71 665 aaPredicted RBP17.61■□□□□ 0.41
IFT20-216ENST00000588477 POF1BQ8WVV4 589 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 PRRX2Q99811 253 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 AGO3Q9H9G7 860 aaKnown RBP17.61■□□□□ 0.41
IFT20-216ENST00000588477 SENP2Q9HC62 589 aa17.61■□□□□ 0.41
IFT20-216ENST00000588477 BARX2Q9UMQ3 279 aaPredicted RBP17.61■□□□□ 0.41
IFT20-216ENST00000588477 GSTTP1A0A1W2PQM5 241 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 IFIT3O14879 490 aaKnown RBP17.6■□□□□ 0.41
IFT20-216ENST00000588477 ATP9AO75110 1047 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 IGBP1P78318 339 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 TCF15Q12870 199 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 COASYQ13057 564 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 TRDNQ13061 729 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 MARCH8Q5T0T0 291 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 CRIPAKQ8N1N5 446 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 FBXL6Q8N531 539 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 SEPT1Q8WYJ6 367 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 CUL5Q93034 780 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 ZBTB10Q96DT7 871 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 OSBPL3Q9H4L5 887 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 ERAP1Q9NZ08 941 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 CFAP54Q96N23 3096 aa17.6■□□□□ 0.41
IFT20-216ENST00000588477 ERICH2A1L162 156 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 MBLAC1A4D2B0 266 aaPredicted RBP17.59■□□□□ 0.41
IFT20-216ENST00000588477 ST18O60284 1047 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 PPFIA3O75145 1194 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 GLP2RO95838 553 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 MRPS6P82932 125 aaKnown RBP17.59■□□□□ 0.41
IFT20-216ENST00000588477 CBX2Q14781 532 aaPredicted RBP17.59■□□□□ 0.41
IFT20-216ENST00000588477 NPAS4Q8IUM7 802 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 GLG1Q92896 1179 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 RPGRIP1Q96KN7 1286 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 FTHL17Q9BXU8 183 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 FAM49AQ9H0Q0 323 aaPredicted RBP17.59■□□□□ 0.41
IFT20-216ENST00000588477 IL25Q9H293 177 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 USP15Q9Y4E8 981 aaPredicted RBP17.59■□□□□ 0.41
IFT20-216ENST00000588477 PCDHGC5Q9Y5F6 944 aa17.59■□□□□ 0.41
IFT20-216ENST00000588477 PLXNA3P51805 1871 aa17.58■□□□□ 0.41
IFT20-216ENST00000588477 MEIS2O14770 477 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 STAG3L1P0CL83 205 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 KCNA2P16389 499 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 TROAPQ12815 778 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 WTAPQ15007 396 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 IER5Q5VY09 327 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 XRRA1Q6P2D8 792 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 PHF7Q9BWX1 381 aaPredicted RBP17.58■□□□□ 0.4
IFT20-216ENST00000588477 SMARCAD1Q9H4L7 1026 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 FAM86C1Q9NVL1 165 aa17.58■□□□□ 0.4
IFT20-216ENST00000588477 PER2O15055 1255 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
IFT20-216ENST00000588477 GATMP50440 423 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 SIGLEC14Q08ET2 396 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 TMEM62Q0P6H9 643 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 SMC5Q8IY18 1101 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 MICAL1Q8TDZ2 1067 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 TLE6Q9H808 572 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 PKD2L1Q9P0L9 805 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 PADI3Q9ULW8 664 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 SQORQ9Y6N5 450 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 ZDBF2Q9HCK1 2354 aa17.57■□□□□ 0.4
IFT20-216ENST00000588477 M0QZ92 97 aa17.56■□□□□ 0.4
IFT20-216ENST00000588477 PIK3CDO00329 1044 aa17.56■□□□□ 0.4
IFT20-216ENST00000588477 SCG2P13521 617 aa17.56■□□□□ 0.4
IFT20-216ENST00000588477 INSRRP14616 1297 aa17.56■□□□□ 0.4
IFT20-216ENST00000588477 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
IFT20-216ENST00000588477 LRFN2Q9ULH4 789 aa17.56■□□□□ 0.4
IFT20-216ENST00000588477 TRPV2Q9Y5S1 764 aa17.56■□□□□ 0.4
IFT20-216ENST00000588477 MYH9P35579 1960 aaKnown RBP17.55■□□□□ 0.4
IFT20-216ENST00000588477 RRN3P2A6NIE6 340 aa17.55■□□□□ 0.4
IFT20-216ENST00000588477 RPLP2P05387 115 aaKnown RBP17.55■□□□□ 0.4
IFT20-216ENST00000588477 VCPP55072 806 aaKnown RBP17.55■□□□□ 0.4
IFT20-216ENST00000588477 PAK2Q13177 524 aa17.55■□□□□ 0.4
IFT20-216ENST00000588477 SPOUT1Q5T280 376 aaKnown RBP17.55■□□□□ 0.4
IFT20-216ENST00000588477 CATIPQ7Z7H3 387 aa17.55■□□□□ 0.4
IFT20-216ENST00000588477 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms