RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 ME3Q16798 604 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 TRIM71Q2Q1W2 868 aaKnown RBP10.05□□□□□ -0.8
SDF2-207ENST00000588472 RASIP1Q5U651 963 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 TMCO2Q7Z6W1 182 aaPredicted RBP10.05□□□□□ -0.8
SDF2-207ENST00000588472 SERINC5Q86VE9 423 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 TEX2Q8IWB9 1127 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 BLIDQ8IZY5 108 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 USP38Q8NB14 1042 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 IL27Q8NEV9 243 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 LMBR1Q8WVP7 490 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 ATXN2LQ8WWM7 1075 aaKnown RBP10.05□□□□□ -0.8
SDF2-207ENST00000588472 FAM122AQ96E09 287 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 PCYT2Q99447 389 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 GAS2L1Q99501 681 aaPredicted RBP10.05□□□□□ -0.8
SDF2-207ENST00000588472 NKX2-4Q9H2Z4 354 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 ORC3Q9UBD5 711 aaPredicted RBP10.05□□□□□ -0.8
SDF2-207ENST00000588472 SAMM50Q9Y512 469 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 NFASCO94856 1347 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 IGLV3-22A0A075B6J6 115 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 CTDNEP1O95476 244 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 CCNE2O96020 404 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 INSRRP14616 1297 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 PLA2G5P39877 138 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 KCNJ6P48051 423 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 STAT5BP51692 787 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 TCTN1Q2MV58 587 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 C8orf34Q49A92 452 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 SWSAP1Q6NVH7 229 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 RUFY4Q6ZNE9 571 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 NIPA1Q7RTP0 329 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 TBCKQ8TEA7 893 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 TRAPPC12Q8WVT3 735 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 PPM1EQ8WY54 764 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 GJA10Q969M2 543 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 FAM49AQ9H0Q0 323 aaPredicted RBP10.04□□□□□ -0.8
SDF2-207ENST00000588472 ZNF576Q9H609 170 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 YBX2Q9Y2T7 364 aaKnown RBP10.04□□□□□ -0.8
SDF2-207ENST00000588472 CDH23Q9H251 3354 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 NRCAMQ92823 1304 aa10.04□□□□□ -0.8
SDF2-207ENST00000588472 DHX15O43143 795 aaKnown RBP10.03□□□□□ -0.8
SDF2-207ENST00000588472 CHMP2AO43633 222 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 LGR5O75473 907 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 XBP1P17861 261 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 SETQ01105 290 aaPredicted RBP10.03□□□□□ -0.8
SDF2-207ENST00000588472 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 IKBKEQ14164 716 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 MBTPS1Q14703 1052 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 PLCB4Q15147 1175 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 RAB30Q15771 203 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 FAM160B1Q5W0V3 765 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 CNKSR3Q6P9H4 555 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 PRUNE2Q8WUY3 3088 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 DNAJB3Q8WWF6 145 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 CRYGNQ8WXF5 182 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 GTF3C6Q969F1 213 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 OSBPL7Q9BZF2 842 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 CERS4Q9HA82 394 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 SLC28A3Q9HAS3 691 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 THEGQ9P2T0 379 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 RAPGEFL1Q9UHV5 662 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 TUBE1Q9UJT0 475 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 CHD7Q9P2D1 2997 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 EMSYQ7Z589 1322 aa10.03□□□□□ -0.8
SDF2-207ENST00000588472 TANC1Q9C0D5 1861 aa10.02□□□□□ -0.8
SDF2-207ENST00000588472 CCDC194A0A1B0GVG4 234 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 MSH4O15457 936 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 EDIL3O43854 480 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 JAK2O60674 1132 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 PARNO95453 639 aaKnown RBP10.02□□□□□ -0.81
SDF2-207ENST00000588472 TDP2O95551 362 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 HOXC8P31273 242 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 CIITAP33076 1130 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 USP11P51784 963 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
SDF2-207ENST00000588472 DEFB103AP81534 67 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 MRPS5P82675 430 aaKnown RBP10.02□□□□□ -0.81
SDF2-207ENST00000588472 RBL2Q08999 1139 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 NONOQ15233 471 aaKnown RBP eCLIP10.02□□□□□ -0.81
SDF2-207ENST00000588472 INF2Q27J81 1249 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 LETM2Q2VYF4 491 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 MARCH8Q5T0T0 291 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 LRCH2Q5VUJ6 765 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 PPP2R2DQ66LE6 453 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 ABHD15Q6UXT9 468 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.02□□□□□ -0.81
SDF2-207ENST00000588472 PLPPR4Q7Z2D5 763 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 RSPH3Q86UC2 560 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 HERC6Q8IVU3 1022 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 CCDC60Q8IWA6 550 aaPredicted RBP10.02□□□□□ -0.81
SDF2-207ENST00000588472 DBF4BQ8NFT6 615 aa10.02□□□□□ -0.81
SDF2-207ENST00000588472 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms