RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DPYDQ12882 1025 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 CUL4BQ13620 913 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 ACVR2BQ13705 512 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 PRAMEF19Q5SWL8 479 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 GJC2Q5T442 439 aaPredicted RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 OLFML2BQ68BL8 750 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 LRSAM1Q6UWE0 723 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 ABHD15Q6UXT9 468 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 GAS2L3Q86XJ1 694 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 SMAP1Q8IYB5 467 aaPredicted RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 GIMAP8Q8ND71 665 aaPredicted RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 RDM1Q8NG50 284 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 ABHD16BQ9H3Z7 469 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 MAGEF1Q9HAY2 307 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 SAGE1Q9NXZ1 904 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 HOOK1Q9UJC3 728 aaKnown RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 ZHX1Q9UKY1 873 aaPredicted RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 GSTTP1A0A1W2PQM5 241 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 MYMKA6NI61 221 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 BIN1O00499 593 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 ZBTB39O15060 712 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 ATG7O95352 703 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 SUPT20HL2P0C7V6 817 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 PLA2G4BP0C869 781 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 ZNF865P0CJ78 1059 aaPredicted RBP12.64□□□□□ -0.39
VMP1-207ENST00000588131 MUTP22033 750 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 SARSP49591 514 aaKnown RBP12.64□□□□□ -0.39
VMP1-207ENST00000588131 SLC12A3P55017 1021 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 TYRO3Q06418 890 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 KIF22Q14807 665 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 MIS18BP1Q6P0N0 1132 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 METTL7BQ6UX53 244 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 CCDC60Q8IWA6 550 aaPredicted RBP12.64□□□□□ -0.39
VMP1-207ENST00000588131 PIGOQ8TEQ8 1089 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 MLXIPQ9HAP2 919 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 GABBR1Q9UBS5 961 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 MAN1B1Q9UKM7 699 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 DNM3Q9UQ16 869 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 WDR81Q562E7 1941 aa12.64□□□□□ -0.39
VMP1-207ENST00000588131 ADCY6O43306 1168 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 EYA4O95677 639 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 SSBP05455 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
VMP1-207ENST00000588131 PSAPP07602 524 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 XRCC5P13010 732 aaKnown RBP12.63□□□□□ -0.39
VMP1-207ENST00000588131 SMPD1P17405 629 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 QARSP47897 775 aaKnown RBP12.63□□□□□ -0.39
VMP1-207ENST00000588131 PSMC5P62195 406 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 ISM2Q6H9L7 571 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 SASS6Q6UVJ0 657 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 DHX37Q8IY37 1157 aaKnown RBP12.63□□□□□ -0.39
VMP1-207ENST00000588131 SPATA20Q8TB22 786 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 TRIB2Q92519 343 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 SMARCE1Q969G3 411 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 CCDC34Q96HJ3 373 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 PCYT2Q99447 389 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 GPR20Q99678 358 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 C7orf25Q9BPX7 421 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 ZSWIM4Q9H7M6 989 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 CASP8AP2Q9UKL3 1982 aa12.63□□□□□ -0.39
VMP1-207ENST00000588131 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 IGKV6D-21A0A0A0MT36 114 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 KLRC4O43908 158 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 ZNF862O60290 1169 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 FKTNO75072 461 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 STBD1O95210 358 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 LYPLA2O95372 231 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 GH1P01241 217 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 CYP11B2P19099 503 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
VMP1-207ENST00000588131 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 NT5DC1Q5TFE4 455 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 C4orf19Q8IY42 314 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 KCTD17Q8N5Z5 321 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
VMP1-207ENST00000588131 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
VMP1-207ENST00000588131 ZNF296Q8WUU4 475 aaPredicted RBP12.62□□□□□ -0.39
VMP1-207ENST00000588131 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 NACC1Q96RE7 527 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 TRIM9Q9C026 710 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 BHMT2Q9H2M3 363 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 TSPY26PQ9H489 355 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
VMP1-207ENST00000588131 LOXHD1Q8IVV2 1947 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 ARID2Q68CP9 1835 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 NPHP3-ACAD11A0A0J9YXS1 232 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 TMEM150BA6NC51 233 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 BACH1O14867 736 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 SMC2O95347 1197 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 RPN1P04843 607 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms