RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CCNE2O96020 404 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 FGBP02675 491 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 PSAPP07602 524 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 SELPP16109 830 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 SFNP31947 248 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 CCL23P55773 120 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 ADAM17P78536 824 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 LRCH2Q5VUJ6 765 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 DIS3L2Q8IYB7 885 aaKnown RBP11.43□□□□□ -0.58
TPM4-207ENST00000588032 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 FBXO18Q8NFZ0 1043 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 RDM1Q8NG50 284 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 TNFRSF25Q93038 417 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 TMX3Q96JJ7 454 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 FAM20AQ96MK3 541 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 PCYT2Q99447 389 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 TEKT3Q9BXF9 490 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 WNT8AQ9H1J5 351 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 MTIF3Q9H2K0 278 aaKnown RBP11.43□□□□□ -0.58
TPM4-207ENST00000588032 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 SETD4Q9NVD3 440 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 LTBP2Q14767 1821 aa11.43□□□□□ -0.58
TPM4-207ENST00000588032 UMODL1Q5DID0 1318 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 HBP1O60381 514 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 CCNT1O60563 726 aaKnown RBP11.42□□□□□ -0.58
TPM4-207ENST00000588032 PSMD10O75832 226 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 TDP2O95551 362 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 CKBP12277 381 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 MARK3P27448 753 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 FXR1P51114 621 aaKnown RBP eCLIP11.42□□□□□ -0.58
TPM4-207ENST00000588032 JAK3P52333 1124 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 EPHB4P54760 987 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 ZNF200P98182 395 aaPredicted RBP11.42□□□□□ -0.58
TPM4-207ENST00000588032 PPFIA1Q13136 1202 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 NR5A1Q13285 461 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 TMEM240Q5SV17 173 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 TAF2Q6P1X5 1199 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 PDXDC2PQ6P474 469 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 POTEBQ6S5H4 581 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 ZNF365Q70YC5 407 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 LRRC8DQ7L1W4 858 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 C16orf59Q7L2K0 433 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 RPAINQ86UA6 219 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 LMBR1Q8WVP7 490 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
TPM4-207ENST00000588032 FOXP1Q9H334 677 aaPredicted RBP11.42□□□□□ -0.58
TPM4-207ENST00000588032 DISC1Q9NRI5 854 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 SAMM50Q9Y512 469 aa11.42□□□□□ -0.58
TPM4-207ENST00000588032 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.42□□□□□ -0.58
TPM4-207ENST00000588032 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
TPM4-207ENST00000588032 MBLAC1A4D2B0 266 aaPredicted RBP11.41□□□□□ -0.58
TPM4-207ENST00000588032 TREHO43280 583 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 MARCH6O60337 910 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 BAG4O95429 457 aaKnown RBP11.41□□□□□ -0.58
TPM4-207ENST00000588032 ACTN1P12814 892 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 INSRRP14616 1297 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 HIC1Q14526 733 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 PLCB4Q15147 1175 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 GRIK4Q16099 956 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 TRIM71Q2Q1W2 868 aaKnown RBP11.41□□□□□ -0.58
TPM4-207ENST00000588032 C9orf50Q5SZB4 431 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 RSPH3Q86UC2 560 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 SLFN12Q8IYM2 578 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 ETNPPLQ8TBG4 499 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 ATP8B4Q8TF62 1192 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
TPM4-207ENST00000588032 HERVK_113Q902F9 699 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 DHX38Q92620 1227 aaKnown RBP11.41□□□□□ -0.58
TPM4-207ENST00000588032 SCLYQ96I15 445 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.41□□□□□ -0.582e-12■■□□□ 12.2
TPM4-207ENST00000588032 KCNMB3Q9NPA1 279 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 PCDH10Q9P2E7 1040 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
TPM4-207ENST00000588032 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.4□□□□□ -0.58
TPM4-207ENST00000588032 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.4□□□□□ -0.58
TPM4-207ENST00000588032 RSPH10B2B2RC85 870 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 CD2BP2O95400 341 aaKnown RBP11.4□□□□□ -0.58
TPM4-207ENST00000588032 RSPH10BP0C881 870 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 ACRP10323 421 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 THPOP40225 353 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 FOSBP53539 338 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 SMAD3P84022 425 aaKnown RBP11.4□□□□□ -0.58
TPM4-207ENST00000588032 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
TPM4-207ENST00000588032 EARS2Q5JPH6 523 aaKnown RBP11.4□□□□□ -0.58
TPM4-207ENST00000588032 ZNF484Q5JVG2 852 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 ZNF618Q5T7W0 954 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 RASIP1Q5U651 963 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 B3GNT9Q6UX72 402 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 MIER3Q7Z3K6 550 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 CCDC60Q8IWA6 550 aaPredicted RBP11.4□□□□□ -0.58
TPM4-207ENST00000588032 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 UIMC1Q96RL1 719 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 NRBP2Q9NSY0 501 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 GABBR1Q9UBS5 961 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 TUBE1Q9UJT0 475 aa11.4□□□□□ -0.58
TPM4-207ENST00000588032 CEP131Q9UPN4 1083 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms