RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 CHAMP1Q96JM3 812 aa11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 TIPINQ9BVW5 301 aa11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 TNMDQ9H2S6 317 aa11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 SMARCAD1Q9H4L7 1026 aa11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 PRDM10Q9NQV6 1147 aa11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 ANKEF1Q9NU02 776 aa11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 ZNF215Q9UL58 517 aaPredicted RBP11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 WDR81Q562E7 1941 aa11.58□□□□□ -0.56
CLPTM1-207ENST00000587537 A0A1B0GVL5 298 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 POLR2DO15514 142 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 LGR5O75473 907 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 SLITRK3O94933 977 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 ARIH2O95376 493 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 CCNE2O96020 404 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 HSPA1AP0DMV8 641 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 HSPA1BP0DMV9 641 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 NDUFA8P51970 172 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 GJA9P57773 515 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 GRIN1Q05586 938 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 SNW1Q13573 536 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 SLC9C1Q4G0N8 1177 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 FBXO46Q6PJ61 603 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 TLK2Q86UE8 772 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 CATSPER3Q86XQ3 398 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 CNNM3Q8NE01 707 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 OR6J1Q8NGC5 347 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 GPR20Q99678 358 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 LXNQ9BS40 222 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 MMTAG2Q9BU76 263 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 KATNAL1Q9BW62 490 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 SEZ6LQ9BYH1 1024 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 UPF3AQ9H1J1 476 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 ZNF302Q9NR11 478 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 PDGFCQ9NRA1 345 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 NRBP2Q9NSY0 501 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 BMP2KQ9NSY1 1161 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 ERAP1Q9NZ08 941 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 PKD2L1Q9P0L9 805 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 DBR1Q9UK59 544 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 MAFBQ9Y5Q3 323 aaPredicted RBP11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 IGSF9BQ9UPX0 1349 aa11.57□□□□□ -0.56
CLPTM1-207ENST00000587537 DDX39AO00148 427 aaKnown RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 EML1O00423 815 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 BACH1O14867 736 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 FOXN1O15353 648 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 TRAK2O60296 914 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 EYA4O95677 639 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 INHAP05111 366 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 SPATA31C1P0DKV0 1188 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 PLCG1P19174 1290 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 CST5P28325 142 aaPredicted RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 TCF7P36402 384 aaPredicted RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 STAT5BP51692 787 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 KARSQ15046 597 aaKnown RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 E2F4Q16254 413 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 XKR3Q5GH77 459 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 CNNM4Q6P4Q7 775 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 SV2BQ7L1I2 683 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 PCSK9Q8NBP7 692 aaKnown RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 LARP4BQ92615 738 aaKnown RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 CCDC43Q96MW1 224 aaKnown RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 JPH2Q9BR39 696 aaPredicted RBP11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 DOCK5Q9H7D0 1870 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 DACT1Q9NYF0 836 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 KCNG1Q9UIX4 513 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 KIAA1024Q9UPX6 916 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 PTCH2Q9Y6C5 1203 aa11.56□□□□□ -0.56
CLPTM1-207ENST00000587537 GSTTP1A0A1W2PQM5 241 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 PP2D1A8MPX8 630 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 GAS2O43903 313 aaKnown RBP11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 MED24O75448 989 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 NR1I2O75469 434 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 CABYRO75952 493 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 SMC2O95347 1197 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 MMP3P08254 477 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 ELNP15502 786 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 SCP2P22307 547 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 CNGA1P29973 690 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 GRB10Q13322 594 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 FSCN1Q16658 493 aaKnown RBP11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 HSDL1Q3SXM5 330 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 SPECC1Q5M775 1068 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 SWSAP1Q6NVH7 229 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 PDXDC2PQ6P474 469 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 RNF180Q86T96 592 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 TPH2Q8IWU9 490 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 GPT2Q8TD30 523 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 RAD54LQ92698 747 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 GLG1Q92896 1179 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 GJA10Q969M2 543 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 CCDC47Q96A33 483 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms