RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 SYTL5Q8TDW5 730 aaPredicted RBP20.64■□□□□ 0.9
RETREG3-205ENST00000586870 LRRC15Q8TF66 581 aa20.64■□□□□ 0.9
RETREG3-205ENST00000586870 HAS1Q92839 578 aa20.64■□□□□ 0.9
RETREG3-205ENST00000586870 CDK5RAP3Q96JB5 506 aa20.64■□□□□ 0.9
RETREG3-205ENST00000586870 DEFB118Q96PH6 123 aa20.64■□□□□ 0.9
RETREG3-205ENST00000586870 CTAGE1Q96RT6 745 aa20.64■□□□□ 0.9
RETREG3-205ENST00000586870 LRRC27Q9C0I9 530 aa20.64■□□□□ 0.9
RETREG3-205ENST00000586870 ZHX1Q9UKY1 873 aaPredicted RBP20.64■□□□□ 0.9
RETREG3-205ENST00000586870 GJB1P08034 283 aa20.64■□□□□ 0.89
RETREG3-205ENST00000586870 SFPQP23246 707 aaKnown RBP eCLIP20.64■□□□□ 0.89
RETREG3-205ENST00000586870 TPD52L1Q16890 204 aaPredicted RBP20.64■□□□□ 0.89
RETREG3-205ENST00000586870 DNTTIP2Q5QJE6 756 aaKnown RBP20.64■□□□□ 0.89
RETREG3-205ENST00000586870 SV2BQ7L1I2 683 aa20.64■□□□□ 0.89
RETREG3-205ENST00000586870 ADSSL1Q8N142 457 aa20.64■□□□□ 0.89
RETREG3-205ENST00000586870 DNERQ8NFT8 737 aa20.64■□□□□ 0.89
RETREG3-205ENST00000586870 CRYGNQ8WXF5 182 aa20.64■□□□□ 0.89
RETREG3-205ENST00000586870 PNMA5Q96PV4 448 aa20.64■□□□□ 0.89
RETREG3-205ENST00000586870 TRIM9Q9C026 710 aa20.64■□□□□ 0.89
RETREG3-205ENST00000586870 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.64■□□□□ 0.89
RETREG3-205ENST00000586870 PLXNB2O15031 1838 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 DOCK3Q8IZD9 2030 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 A0A1B0GTH6 734 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 SPDYE3A6NKU9 549 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 PIK3CDO00329 1044 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 TFRCP02786 760 aaKnown RBP20.63■□□□□ 0.89
RETREG3-205ENST00000586870 HOXA13P31271 388 aaPredicted RBP20.63■□□□□ 0.89
RETREG3-205ENST00000586870 PPP1R2P41236 205 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 ALDH5A1P51649 535 aaPredicted RBP20.63■□□□□ 0.89
RETREG3-205ENST00000586870 STIM1Q13586 685 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 NR1I3Q14994 352 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 ARMCX5Q6P1M9 558 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 FCHSD1Q86WN1 690 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 GIMAP8Q8ND71 665 aaPredicted RBP20.63■□□□□ 0.89
RETREG3-205ENST00000586870 NSUN6Q8TEA1 469 aaKnown RBP20.63■□□□□ 0.89
RETREG3-205ENST00000586870 NELFBQ8WX92 580 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 TAAR1Q96RJ0 339 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 RMDN3Q96TC7 470 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 INTS13Q9NVM9 706 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 PCDHA12Q9UN75 941 aa20.63■□□□□ 0.89
RETREG3-205ENST00000586870 SREBF1P36956 1147 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 PRCPP42785 496 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 ARHGAP4P98171 946 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 SPAG1Q07617 926 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 PDE4DQ08499 809 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 TMEM119Q4V9L6 283 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 SLFN12Q8IYM2 578 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 FGD4Q96M96 766 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 ABHD16BQ9H3Z7 469 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 KCNMB3Q9NPA1 279 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 KCND1Q9NSA2 647 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 BLOC1S4Q9NUP1 217 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 GDAQ9Y2T3 454 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 ZNF236Q9UL36 1845 aa20.62■□□□□ 0.89
RETREG3-205ENST00000586870 OPLAHO14841 1288 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 TBX3O15119 743 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 MSCO60682 206 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 SNAI1O95863 264 aaPredicted RBP20.61■□□□□ 0.89
RETREG3-205ENST00000586870 CYBAP13498 195 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 HSD17B4P51659 736 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 ACVR2BQ13705 512 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 Q4G0T1 1027 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 FILIP1LQ4L180 1135 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 HSP90AA4PQ58FG1 418 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 EEPD1Q7L9B9 569 aa20.61■□□□□ 0.89
RETREG3-205ENST00000586870 U2AF1L4Q8WU68 220 aaKnown RBP20.61■□□□□ 0.89
RETREG3-205ENST00000586870 PAK6Q9NQU5 681 aaPredicted RBP20.61■□□□□ 0.89
RETREG3-205ENST00000586870 R3HCC1Q9Y3T6 440 aaKnown RBP20.61■□□□□ 0.89
RETREG3-205ENST00000586870 KDM3AQ9Y4C1 1321 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 LOC102724159A0A0B4J2E5 919 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 POTEMA6NI47 508 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 SGPL1O95470 568 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 IGHA2P01877 340 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 CIITAP33076 1130 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 KCNJ6P48051 423 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 ASIC1P78348 528 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 TBX2Q13207 712 aaPredicted RBP20.6■□□□□ 0.89
RETREG3-205ENST00000586870 PWP2Q15269 919 aaKnown RBP20.6■□□□□ 0.89
RETREG3-205ENST00000586870 HYIQ5T013 277 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 CNNM4Q6P4Q7 775 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 APTXQ7Z2E3 356 aaKnown RBP20.6■□□□□ 0.89
RETREG3-205ENST00000586870 CCDC112Q8NEF3 446 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 TRPV1Q8NER1 839 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 LARP4BQ92615 738 aaKnown RBP20.6■□□□□ 0.89
RETREG3-205ENST00000586870 DHTKD1Q96HY7 919 aaPredicted RBP20.6■□□□□ 0.89
RETREG3-205ENST00000586870 EXOC1Q9NV70 894 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 LIMA1Q9UHB6 759 aaKnown RBP20.6■□□□□ 0.89
RETREG3-205ENST00000586870 DDX20Q9UHI6 824 aaKnown RBP20.6■□□□□ 0.89
RETREG3-205ENST00000586870 FAM184BQ9ULE4 1060 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 PVALEFA0A1B0GWK0 134 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 POTEFA5A3E0 1075 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 SEPT4O43236 478 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 CYP3A4P08684 503 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 GJA8P48165 433 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 COBLL1Q53SF7 1204 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 SPECC1LQ69YQ0 1117 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 ANKRD20A12PQ8NF67 263 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 RAD54LQ92698 747 aa20.6■□□□□ 0.89
RETREG3-205ENST00000586870 NT5C3AQ9H0P0 336 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms