RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 CCDC83Q8IWF9 413 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 CACNA2D3Q8IZS8 1091 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 AGAP11Q8TF27 550 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 AENQ8WTP8 325 aaKnown RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 CCT6BQ92526 530 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 NCSTNQ92542 709 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 PIDD1Q9HB75 910 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 PA2G4Q9UQ80 394 aaKnown RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 AOX1Q06278 1338 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 TMEM247A6NEH6 219 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 EIF3FO00303 357 aaPredicted RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 WDR46O15213 610 aaKnown RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 TBC1D12O60347 775 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 USP2O75604 605 aaPredicted RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 HOXD12P35452 270 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 STAT6P42226 847 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 UBASH3AP57075 661 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 FAM160A1Q05DH4 1040 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 CKAP4Q07065 602 aaKnown RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 GRIK5Q16478 980 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 NBPF12Q5TAG4 269 aaPredicted RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 PACS1Q6VY07 963 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 CATIPQ7Z7H3 387 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 LRRC49Q8IUZ0 686 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 NOA1Q8NC60 698 aaKnown RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 SSH3Q8TE77 659 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 ATRIPQ8WXE1 791 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 DDX12PQ92771 950 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 SLC10A4Q96EP9 437 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 IFT43Q96FT9 208 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 SH3GL1Q99961 368 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 SCAF8Q9UPN6 1271 aaKnown RBP10.87□□□□□ -0.67
ZNF540-203ENST00000586134 DOCK2Q92608 1830 aa10.87□□□□□ -0.67
ZNF540-203ENST00000586134 MAST2Q6P0Q8 1798 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 WFS1O76024 890 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 MAP4K4O95819 1239 aaPredicted RBP10.86□□□□□ -0.67
ZNF540-203ENST00000586134 ATP2A2P16615 1042 aaKnown RBP10.86□□□□□ -0.67
ZNF540-203ENST00000586134 PDE1AP54750 535 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 BPIFB4P59827 614 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 ARPC4P59998 168 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 INAQ16352 499 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 CCDC102BQ68D86 513 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 ANO7Q6IWH7 933 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 CACNA2D4Q7Z3S7 1137 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 IRGQQ8WZA9 623 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 NACC2Q96BF6 587 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 AGBL1Q96MI9 1066 aa10.86□□□□□ -0.67
ZNF540-203ENST00000586134 GMNCA6NCL1 334 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 CA8P35219 290 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 MLH1P40692 756 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 PHKA1P46020 1223 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 ATP8B2P98198 1209 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 KLC1Q07866 573 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 NSUN2Q08J23 767 aaKnown RBP eCLIP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 NNTQ13423 1086 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 RCN1Q15293 331 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 IQCEQ6IPM2 695 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 NAA16Q6N069 864 aaPredicted RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 TOGARAM2Q6ZUX3 1019 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 NANOGNBQ7Z5D8 188 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 DHTKD1Q96HY7 919 aaPredicted RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 ABHD8Q96I13 439 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 WNK4Q96J92 1243 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 ZMAT2Q96NC0 199 aaKnown RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 PANX2Q96RD6 677 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 CCDC28BQ9BUN5 200 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 UBAP1Q9NZ09 502 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 GAKO14976 1311 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 TMEM110-MUSTN1A8MSY1 372 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 E7EVH7 732 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 TRPA1O75762 1119 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 SP100P23497 879 aaPredicted RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 CD97P48960 835 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 NCAPHQ15003 741 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 KARSQ15046 597 aaKnown RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 TTMPQ5BVD1 217 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 ZNF569Q5MCW4 686 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 FAAH2Q6GMR7 532 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 EMBQ6PCB8 327 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 CD302Q8IX05 232 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 STKLD1Q8NE28 680 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 FAM151AQ8WW52 585 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 FAM167BQ9BTA0 163 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
ZNF540-203ENST00000586134 TM6SF1Q9BZW5 370 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 MIS12Q9H081 205 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 RMND1Q9NWS8 449 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 CEP131Q9UPN4 1083 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 N6AMT1Q9Y5N5 214 aa10.85□□□□□ -0.67
ZNF540-203ENST00000586134 HMGB1P1B2RPK0 211 aaPredicted RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 KDM1AO60341 852 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
ZNF540-203ENST00000586134 ATP6V1C1P21283 382 aa10.84□□□□□ -0.67
ZNF540-203ENST00000586134 CDC25CP30307 473 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms