RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TRAPPC12Q8WVT3 735 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 APBB2Q92870 758 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 GLG1Q92896 1179 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 GPRASP2Q96D09 838 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 PABPC5Q96DU9 382 aaKnown RBP13.35□□□□□ -0.27
LIG3-207ENST00000586119 FAM49AQ9H0Q0 323 aaPredicted RBP13.35□□□□□ -0.27
LIG3-207ENST00000586119 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
LIG3-207ENST00000586119 IGFLR1Q9H665 355 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
LIG3-207ENST00000586119 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
LIG3-207ENST00000586119 JADE2Q9NQC1 790 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 SEC63Q9UGP8 760 aaKnown RBP13.35□□□□□ -0.27
LIG3-207ENST00000586119 C5orf42Q9H799 3197 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 KIAA1671Q9BY89 1806 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 MBLAC1A4D2B0 266 aaPredicted RBP13.34□□□□□ -0.27
LIG3-207ENST00000586119 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 SLC27A2O14975 620 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 LINC01565O15544 149 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 ARP10275 920 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 INSRRP14616 1297 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 DNAJB1P25685 340 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 CD52P31358 61 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 GATMP50440 423 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 HYAL1Q12794 435 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 COL19A1Q14993 1142 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 TIGD5Q53EQ6 642 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 TYW1BQ6NUM6 668 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 RPAINQ86UA6 219 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 ZNF689Q96CS4 500 aaPredicted RBP13.34□□□□□ -0.27
LIG3-207ENST00000586119 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 ERAP1Q9NZ08 941 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 TUBE1Q9UJT0 475 aa13.34□□□□□ -0.27
LIG3-207ENST00000586119 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 DGKIO75912 1065 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 IBSPP21815 317 aaPredicted RBP13.33□□□□□ -0.28
LIG3-207ENST00000586119 MCM5P33992 734 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 MTMR1Q13613 665 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 CREB3L3Q68CJ9 461 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 FANCBQ8NB91 859 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 GIMAP8Q8ND71 665 aaPredicted RBP13.33□□□□□ -0.28
LIG3-207ENST00000586119 TCEANC2Q96MN5 208 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 LZTS2Q9BRK4 669 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 SMARCAD1Q9H4L7 1026 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 HCN4Q9Y3Q4 1203 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
LIG3-207ENST00000586119 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 RB1P06400 928 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 IRS1P35568 1242 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 GNAQP50148 359 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 MRPS6P82932 125 aaKnown RBP13.32□□□□□ -0.28
LIG3-207ENST00000586119 ZP2Q05996 745 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 BTG3Q14201 252 aaPredicted RBP13.32□□□□□ -0.28
LIG3-207ENST00000586119 PLCB4Q15147 1175 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 NECTIN1Q15223 517 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 CTC1Q2NKJ3 1217 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 PAN2Q504Q3 1202 aaKnown RBP13.32□□□□□ -0.28
LIG3-207ENST00000586119 TAF2Q6P1X5 1199 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 TMTC3Q6ZXV5 915 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 CLP1Q92989 425 aaKnown RBP13.32□□□□□ -0.28
LIG3-207ENST00000586119 TMEM87BQ96K49 555 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 TMEM260Q9NX78 707 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 PCDHGC5Q9Y5F6 944 aa13.32□□□□□ -0.28
LIG3-207ENST00000586119 MRPL42Q9Y6G3 142 aaKnown RBP13.32□□□□□ -0.28
LIG3-207ENST00000586119 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 SPDYE3A6NKU9 549 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 LIFRP42702 1097 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 ITGB3BPQ13352 177 aaPredicted RBP13.31□□□□□ -0.28
LIG3-207ENST00000586119 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 TSHZ1Q6ZSZ6 1077 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 MICU3Q86XE3 530 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 TMTC2Q8N394 836 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 CDHR1Q96JP9 859 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 MXRA8Q9BRK3 442 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 ESYT1Q9BSJ8 1104 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 KCNH7Q9NS40 1196 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 SLC9A2Q9UBY0 812 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 BRPF3Q9ULD4 1205 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 SLC12A7Q9Y666 1083 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 PLXNA4Q9HCM2 1894 aa13.31□□□□□ -0.28
LIG3-207ENST00000586119 PRR33A8MZF0 331 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 MBTPS2O43462 519 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 MGEA5O60502 916 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 TBX10O75333 385 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 ITGB1P05556 798 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 ACTR2P61160 394 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
LIG3-207ENST00000586119 ALYREFQ86V81 257 aaKnown RBP13.3□□□□□ -0.28
LIG3-207ENST00000586119 SPPL3Q8TCT6 385 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 MTA3Q9BTC8 594 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 JPH1Q9HDC5 661 aaPredicted RBP13.3□□□□□ -0.28
LIG3-207ENST00000586119 PADI3Q9ULW8 664 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms