RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 SMPD1P17405 629 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 LBX1P52954 281 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 NKX3-2P78367 333 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 SP2Q02086 613 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 PLPPR4Q7Z2D5 763 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 RNF180Q86T96 592 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 PCSK9Q8NBP7 692 aaKnown RBP14.47□□□□□ -0.09
TRIM47-202ENST00000585333 EPSTI1Q96J88 318 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 GPR20Q99678 358 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 HSD17B14Q9BPX1 270 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 LXNQ9BS40 222 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 GTPBP4Q9BZE4 634 aaKnown RBP14.47□□□□□ -0.09
TRIM47-202ENST00000585333 ZNF302Q9NR11 478 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 NRBP2Q9NSY0 501 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 KCND2Q9NZV8 630 aa14.47□□□□□ -0.09
TRIM47-202ENST00000585333 DDX20Q9UHI6 824 aaKnown RBP14.47□□□□□ -0.09
TRIM47-202ENST00000585333 GNEQ9Y223 722 aaKnown RBP14.47□□□□□ -0.09
TRIM47-202ENST00000585333 A0A1B0GVL5 298 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 A6NJR5 290 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 POLR2DO15514 142 aaKnown RBP14.46□□□□□ -0.09
TRIM47-202ENST00000585333 LGR5O75473 907 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 ZNF202O95125 648 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 LETM1O95202 739 aaPredicted RBP14.46□□□□□ -0.09
TRIM47-202ENST00000585333 CCNE2O96020 404 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 SLFN14P0C7P3 912 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 TCF7P36402 384 aaPredicted RBP14.46□□□□□ -0.09
TRIM47-202ENST00000585333 NDUFA8P51970 172 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 GJA9P57773 515 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 XKR3Q5GH77 459 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 PDXDC2PQ6P474 469 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 TPH2Q8IWU9 490 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 ARRDC4Q8NCT1 418 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 CNNM3Q8NE01 707 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 GLG1Q92896 1179 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 CCDC47Q96A33 483 aaKnown RBP14.46□□□□□ -0.09
TRIM47-202ENST00000585333 JPH2Q9BR39 696 aaPredicted RBP14.46□□□□□ -0.09
TRIM47-202ENST00000585333 UPF3AQ9H1J1 476 aaKnown RBP14.46□□□□□ -0.09
TRIM47-202ENST00000585333 TNMDQ9H2S6 317 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 ANKEF1Q9NU02 776 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 ERAP1Q9NZ08 941 aa14.46□□□□□ -0.09
TRIM47-202ENST00000585333 ZSWIM8A7E2V4 1837 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 IGSF9BQ9UPX0 1349 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 IGKV6D-21A0A0A0MT36 114 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 DYNC1LI2O43237 492 aaPredicted RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 CABYRO75952 493 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 SLITRK3O94933 977 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 HOXD8P13378 290 aaPredicted RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 CST5P28325 142 aaPredicted RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 STAT5BP51692 787 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 SP4Q02446 784 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 GRIN1Q05586 938 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 ZRSR1Q15695 479 aaKnown RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 TMEM119Q4V9L6 283 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 SPECC1Q5M775 1068 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 PRAMEF19Q5SWL8 479 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 SV2BQ7L1I2 683 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 CATSPER3Q86XQ3 398 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 CKAP2LQ8IYA6 745 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 FMR1NBQ8N0W7 255 aaPredicted RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 LARP4BQ92615 738 aaKnown RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 DYDC2Q96IM9 177 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 TIPINQ9BVW5 301 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 SEZ6LQ9BYH1 1024 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 XPNPEP3Q9NQH7 507 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 GABBR1Q9UBS5 961 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 DBR1Q9UK59 544 aaKnown RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 KIAA1024Q9UPX6 916 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 MAFBQ9Y5Q3 323 aaPredicted RBP14.45□□□□□ -0.1
TRIM47-202ENST00000585333 LOXHD1Q8IVV2 1947 aa14.45□□□□□ -0.1
TRIM47-202ENST00000585333 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 EML1O00423 815 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 GADD45BO75293 160 aaPredicted RBP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 EYA4O95677 639 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 MMP3P08254 477 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 C6orf222P0C671 652 aaPredicted RBP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 PLCG1P19174 1290 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 CYP4A11Q02928 519 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 FSCN1Q16658 493 aaKnown RBP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 HSDL1Q3SXM5 330 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 SWSAP1Q6NVH7 229 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 PDILTQ8N807 584 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 AFG1LQ8WV93 481 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 BBXQ8WY36 941 aaPredicted RBP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 GJA10Q969M2 543 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 DHX58Q96C10 678 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 MMTAG2Q9BU76 263 aaKnown RBP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRIM47-202ENST00000585333 NUP62CLQ9H1M0 184 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 DACT1Q9NYF0 836 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 KCNG1Q9UIX4 513 aa14.44□□□□□ -0.1
TRIM47-202ENST00000585333 GSTTP1A0A1W2PQM5 241 aa14.43□□□□□ -0.1
TRIM47-202ENST00000585333 POTEB3A0JP26 581 aa14.43□□□□□ -0.1
TRIM47-202ENST00000585333 ARHGEF35A5YM69 484 aa14.43□□□□□ -0.1
TRIM47-202ENST00000585333 PP2D1A8MPX8 630 aa14.43□□□□□ -0.1
TRIM47-202ENST00000585333 GAS2O43903 313 aaKnown RBP14.43□□□□□ -0.1
TRIM47-202ENST00000585333 HBP1O60381 514 aa14.43□□□□□ -0.1
TRIM47-202ENST00000585333 MED24O75448 989 aa14.43□□□□□ -0.1
TRIM47-202ENST00000585333 SMC2O95347 1197 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms