RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 MAF1Q9H063 256 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 R3HDMLQ9H3Y0 253 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CDC23Q9UJX2 597 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CCDC151A5D8V7 595 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MEIS1O00470 390 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SLC25A27O95847 323 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 GYPCP04921 128 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CASP14P31944 242 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 COPB1P53618 953 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 STX17P56962 302 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MRPS9P82933 396 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SRGAP1Q7Z6B7 1085 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 HNRNPLLQ8WVV9 542 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PLIN2Q99541 437 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MMTAG2Q9BU76 263 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 DISC1Q9NRI5 854 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SOWAHDA6NJG2 315 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ARP10275 920 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ITGB5P18084 799 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 STAT6P42226 847 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ERVK-24P63145 666 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 RAD9BQ6WBX8 426 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ZNF771Q7L3S4 317 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 GTF3C2Q8WUA4 911 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NELFBQ8WX92 580 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 THAP9Q9H5L6 903 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MRPL44Q9H9J2 332 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ARFGAP3Q9NP61 516 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PFASO15067 1338 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 TEX35Q5T0J7 233 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ZNF662Q6ZS27 426 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NSUN6Q8TEA1 469 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 IQCDQ96DY2 449 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MTRQ99707 1265 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 WDR11Q9BZH6 1224 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ABHD10Q9NUJ1 306 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 UBIAD1Q9Y5Z9 338 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 TESPA1A2RU30 521 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CTAGE9A4FU28 777 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NR3C2P08235 984 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 COPB2P35606 906 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 KRT79Q5XKE5 535 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CC2D1AQ6P1N0 951 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ADSSL1Q8N142 457 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CCDC47Q96A33 483 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CALML4Q96GE6 196 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 DHTKD1Q96HY7 919 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NUDT12Q9BQG2 462 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 UBXN6Q9BZV1 441 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 KBTBD4Q9NVX7 518 aa16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ZNFX1Q9P2E3 1918 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 RHOBTB3O94955 611 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PLCG1P19174 1290 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CCND2P30279 289 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CNTN2Q02246 1040 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SPIRE1Q08AE8 756 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PTPN21Q16825 1174 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 WDR78Q5VTH9 848 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NIPA1Q7RTP0 329 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 STAMQ92783 540 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SLC5A5Q92911 643 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 DESI2Q9BSY9 194 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CCDC66A2RUB6 948 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 TOMM70O94826 608 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SLC10A3P09131 477 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 BCRP11274 1271 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PLA2G4AP47712 749 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 WHAMMP3Q1A5X7 153 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 COBLL1Q53SF7 1204 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NAALADL2Q58DX5 795 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 LRCH2Q5VUJ6 765 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PARK7Q99497 189 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 NUP58Q9BVL2 599 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PORCNQ9H237 461 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 KCNH7Q9NS40 1196 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 VAV3Q9UKW4 847 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 KIAA1217Q5T5P2 1943 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 TMEM88BA6NKF7 163 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PSMA7O14818 248 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PSMD10O75832 226 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CASP1P29466 404 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms