RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, human

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00473-205	ENST00000584911	NKRF	O15226	690 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	AKR1B10	O60218	316 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	BUB1B	O60566	1050 aa	Predicted RBP	13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	ERVK-9	P63128	1117 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	MYO1E	Q12965	1108 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	SLMAP	Q14BN4	828 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	RRP12	Q5JTH9	1297 aa	Known RBP	13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	OR2W6P	Q8NHA6	318 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	TTLL11	Q8NHH1	800 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	P2RX5	Q93086	422 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	CCDC47	Q96A33	483 aa	Known RBP	13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	LRRC45	Q96CN5	670 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	EYA3	Q99504	573 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	SH3GL3	Q99963	347 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	NDST4	Q9H3R1	872 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	SLC39A2	Q9NP94	309 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	KCNMB3	Q9NPA1	279 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	PGAP2	Q9UHJ9	254 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	BAIAP2L1	Q9UHR4	511 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	RTL9	Q8NET4	1388 aa		13.09	□□□□□ -0.31
LINC00473-205	ENST00000584911	BACH1	O14867	736 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	ATP2C2	O75185	946 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	ALAD	P13716	330 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	MTIF2	P46199	727 aa	Known RBP	13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	CUL1	Q13616	776 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	ANKRD40	Q6AI12	368 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	ANKRD13C	Q8N6S4	541 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	CENPT	Q96BT3	561 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	TBC1D31	Q96DN5	1066 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	SPDL1	Q96EA4	605 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	DBNDD1	Q9H9R9	158 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	KIF9	Q9HAQ2	790 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	HOMER3	Q9NSC5	361 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	SSU72P8	A0A1W2PR75	194 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	BICDL2	A1A5D9	508 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	PHF20L1	A8MW92	1017 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	RIMBP2	O15034	1052 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	BUB1	O43683	1085 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	MBD4	O95243	580 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	CSF1R	P07333	972 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	ARID4A	P29374	1257 aa	Predicted RBP	13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	PPP1R7	Q15435	360 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	MEI1	Q5TIA1	1274 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	BAP1	Q92560	729 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	THOC1	Q96FV9	657 aa	Known RBP	13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	PLA2G12B	Q9BX93	195 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	KBTBD4	Q9NVX7	518 aa		13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911		V9GY48	417 aa	Predicted RBP	13.08	□□□□□ -0.32
LINC00473-205	ENST00000584911	MYH7B	A7E2Y1	1941 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	DOCK2	Q92608	1830 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	hCG_1642624	A0A1W2PR95	340 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ANP32D	O95626	131 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	SLC1A4	P43007	532 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	TNNC1	P63316	161 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ERMARD	Q5T6L9	678 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	CCDC63	Q8NA47	563 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	USP38	Q8NB14	1042 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	GPR101	Q96P66	508 aa	Predicted RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	SPAG5	Q96R06	1193 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	CNOT7	Q9UIV1	285 aa	Known RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	CFAP73	A6NFT4	308 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	LIN7A	O14910	233 aa	Predicted RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ECE2	O60344	883 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	PLEKHA8P1	O95397	391 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	MCM7	P33993	719 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	CTNNA1	P35221	906 aa	Known RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	HIRA	P54198	1017 aa	Predicted RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ZNF268	Q14587	947 aa	Predicted RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	MIS18BP1	Q6P0N0	1132 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	CPLX4	Q7Z7G2	160 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	CCDC197	Q8NCU1	140 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	CHMP6	Q96FZ7	201 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ZNF570	Q96NI8	536 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	GREM2	Q9H772	168 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	KCNQ5	Q9NR82	932 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	ANKIB1	Q9P2G1	1089 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	SWAP70	Q9UH65	585 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	GGA1	Q9UJY5	639 aa		13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	NOVA2	Q9UNW9	492 aa	Known RBP	13.07	□□□□□ -0.32
LINC00473-205	ENST00000584911	SCN9A	Q15858	1988 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	PCNT	O95613	3336 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	LRRC53	A6NM62	1247 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	CES2	O00748	559 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	PALM	O75781	387 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	UFL1	O94874	794 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	HSPA1A	P0DMV8	641 aa	Known RBP	13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	HSPA1B	P0DMV9	641 aa	Known RBP	13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	GFPT1	Q06210	699 aa	Predicted RBP	13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	ITIH4	Q14624	930 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	DOK7	Q18PE1	504 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	METTL24	Q5JXM2	366 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	HGSNAT	Q68CP4	663 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	VGLL2	Q8N8G2	317 aa		13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	ZC3H15	Q8WU90	426 aa	Known RBP	13.06	□□□□□ -0.32
LINC00473-205	ENST00000584911	TLCD1	Q96CP7	247 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms