RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 VPS54Q9P1Q0 977 aa20.34■□□□□ 0.85
ERBB2-221ENST00000584888 PRRC2BQ5JSZ5 2229 aaKnown RBP20.33■□□□□ 0.85
ERBB2-221ENST00000584888 KAT6AQ92794 2004 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 GSTTP1A0A1W2PQM5 241 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 GJB5O95377 273 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 DEXIO95424 95 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 ARP10275 920 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 ANKRD1Q15327 319 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 TRIM22Q8IYM9 498 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 FAM177A1Q8N128 213 aaPredicted RBP20.33■□□□□ 0.85
ERBB2-221ENST00000584888 REXO1Q8N1G1 1221 aaKnown RBP20.33■□□□□ 0.85
ERBB2-221ENST00000584888 CCDC148Q8NFR7 591 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 DBF4BQ8NFT6 615 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 RAD9AQ99638 391 aa20.33■□□□□ 0.85
ERBB2-221ENST00000584888 TSPYL2Q9H2G4 693 aaPredicted RBP20.33■□□□□ 0.85
ERBB2-221ENST00000584888 ZNF215Q9UL58 517 aaPredicted RBP20.33■□□□□ 0.85
ERBB2-221ENST00000584888 NFASCO94856 1347 aa20.32■□□□□ 0.84
ERBB2-221ENST00000584888 PTPRSQ13332 1948 aa20.32■□□□□ 0.84
ERBB2-221ENST00000584888 CPLX1O14810 134 aa20.32■□□□□ 0.84
ERBB2-221ENST00000584888 GNAT1P11488 350 aa20.32■□□□□ 0.84
ERBB2-221ENST00000584888 NPY5RQ15761 445 aa20.32■□□□□ 0.84
ERBB2-221ENST00000584888 KRT40Q6A162 431 aa20.32■□□□□ 0.84
ERBB2-221ENST00000584888 CPLX2Q6PUV4 134 aaKnown RBP20.32■□□□□ 0.84
ERBB2-221ENST00000584888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.32■□□□□ 0.84
ERBB2-221ENST00000584888 BICD2Q8TD16 824 aa20.32■□□□□ 0.84
ERBB2-221ENST00000584888 SLKQ9H2G2 1235 aaPredicted RBP20.32■□□□□ 0.84
ERBB2-221ENST00000584888 IGLV3-22A0A075B6J6 115 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 FAM86B1E9PN63 330 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 M0R2N6 131 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 CTDNEP1O95476 244 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 FAM86B2P0C5J1 330 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 ADAM17P78536 824 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 GRB10Q13322 594 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 PLEKHG4Q58EX7 1191 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 FAM117BQ6P1L5 589 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 RASGRP4Q8TDF6 673 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 SEPT1Q8WYJ6 367 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
ERBB2-221ENST00000584888 AGO4Q9HCK5 861 aaKnown RBP20.31■□□□□ 0.84
ERBB2-221ENST00000584888 CAND2O75155 1236 aa20.3■□□□□ 0.84
ERBB2-221ENST00000584888 CIITAP33076 1130 aa20.3■□□□□ 0.84
ERBB2-221ENST00000584888 TCF7P36402 384 aaPredicted RBP20.3■□□□□ 0.84
ERBB2-221ENST00000584888 NEK4P51957 841 aa20.3■□□□□ 0.84
ERBB2-221ENST00000584888 ITGB3BPQ13352 177 aaPredicted RBP20.3■□□□□ 0.84
ERBB2-221ENST00000584888 MKRN4PQ13434 485 aaPredicted RBP20.3■□□□□ 0.84
ERBB2-221ENST00000584888 SKIV2LQ15477 1246 aaKnown RBP20.3■□□□□ 0.84
ERBB2-221ENST00000584888 ME3Q16798 604 aa20.3■□□□□ 0.84
ERBB2-221ENST00000584888 LMBR1Q8WVP7 490 aa20.3■□□□□ 0.84
ERBB2-221ENST00000584888 KIF2CQ99661 725 aa20.3■□□□□ 0.84
ERBB2-221ENST00000584888 OSBPL7Q9BZF2 842 aa20.3■□□□□ 0.84
ERBB2-221ENST00000584888 STK36Q9NRP7 1315 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 LPXNO60711 386 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 LARGE1O95461 756 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 AMHP03971 560 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 CTSHP09668 335 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 DAGLBQ8NCG7 672 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 SEPT8Q92599 483 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 PCYT2Q99447 389 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 PKD2L1Q9P0L9 805 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 SLC9A2Q9UBY0 812 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 PCDHA4Q9UN74 947 aa20.29■□□□□ 0.84
ERBB2-221ENST00000584888 NRCAMQ92823 1304 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 TNFRSF10AO00220 468 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 DHX15O43143 795 aaKnown RBP20.28■□□□□ 0.84
ERBB2-221ENST00000584888 CDKL5O76039 1030 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 ATG7O95352 703 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 NLRP5P59047 1200 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 ERVK-21P61565 698 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 TFF2Q03403 129 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 PLA2G4DQ86XP0 818 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 MYOCDQ8IZQ8 938 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 ADAMTS19Q8TE59 1207 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 JPH1Q9HDC5 661 aaPredicted RBP20.28■□□□□ 0.84
ERBB2-221ENST00000584888 INSL6Q9Y581 213 aa20.28■□□□□ 0.84
ERBB2-221ENST00000584888 LINC01553A4QN01 128 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 ZNF76P36508 570 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 FAM26DQ5JW98 314 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 GALNT17Q6IS24 598 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 IL27Q8NEV9 243 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 GTF3C6Q969F1 213 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 LENG9Q96B70 501 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 TGS1Q96RS0 853 aaKnown RBP20.27■□□□□ 0.84
ERBB2-221ENST00000584888 SUGCTQ9HAC7 445 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 MTUS1Q9ULD2 1270 aa20.27■□□□□ 0.84
ERBB2-221ENST00000584888 WDR81Q562E7 1941 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 FDPSP14324 419 aaKnown RBP20.26■□□□□ 0.83
ERBB2-221ENST00000584888 MARK3P27448 753 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 USP11P51784 963 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 ACTR2P61160 394 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 BLIDQ8IZY5 108 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 NECAB1Q8N987 351 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 GDPD5Q8WTR4 605 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 GLG1Q92896 1179 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 SDF4Q9BRK5 362 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 PHF20Q9BVI0 1012 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 SMARCAD1Q9H4L7 1026 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 ERAP1Q9NZ08 941 aa20.26■□□□□ 0.83
ERBB2-221ENST00000584888 SPTBN5Q9NRC6 3674 aaKnown RBP20.26■□□□□ 0.83
ERBB2-221ENST00000584888 IGKV6D-21A0A0A0MT36 114 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 DTNBO60941 627 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms