RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 HNRNPRO43390 633 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 FDPSP14324 419 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 GSTM4Q03013 218 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 NCAPHQ15003 741 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 KCTD16Q68DU8 428 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 ADALQ6DHV7 355 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 SND1Q7KZF4 910 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 MAEAQ7L5Y9 396 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 ZNF554Q86TJ5 538 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 SP8Q8IXZ3 490 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 ARHGAP18Q8N392 663 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 DEPTORQ8TB45 409 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 DPF2Q92785 391 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 ZNF274Q96GC6 653 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 SEC16BQ96JE7 1060 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 EPB41L4AQ9HCS5 686 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 EXOC1Q9NV70 894 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
CDK5RAP3-232ENST00000584168 G3V3G9 751 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SERPINC1P01008 464 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 PDGFRBP09619 1106 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ATP1A3P13637 1013 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 GSTT1P30711 240 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SLC44A4Q53GD3 710 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 AENQ8WTP8 325 aaKnown RBP12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 MKS1Q9NXB0 559 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 DLGAP2Q9P1A6 1054 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 MTMR7Q9Y216 660 aa12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CTDP1Q9Y5B0 961 aaPredicted RBP12.96□□□□□ -0.34
CDK5RAP3-232ENST00000584168 COL11A2P13942 1736 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 MINDY4BA8MYZ0 360 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 KCNA2P16389 499 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 PCK1P35558 622 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 KLC1Q07866 573 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ITGA7Q13683 1181 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 TBC1D1Q86TI0 1168 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 PDILTQ8N807 584 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SREK1Q8WXA9 508 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 RSPH1Q8WYR4 309 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 PPANQ9NQ55 473 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CLIC4Q9Y696 253 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 HSF2BPO75031 334 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ZFYP08048 801 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 NR1D1P20393 614 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SCNN1DP51172 638 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 APBA1Q02410 837 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 STK38Q15208 465 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 AOC3Q16853 763 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 OR52E8Q6IFG1 317 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 OTUD6AQ7L8S5 288 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 WDR60Q8WVS4 1066 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CLMNQ96JQ2 1002 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SNX27Q96L92 541 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ZMAT2Q96NC0 199 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SLC7A5P2Q9GIP4 190 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CARD9Q9H257 536 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CEP131Q9UPN4 1083 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 TIMM22Q9Y584 194 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 A0A1B0GUL6 1792 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SEPT2Q15019 361 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 UBE3CQ15386 1083 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 LINC00301Q8NCQ3 95 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 NSUN4Q96CB9 384 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SUCLA2Q9P2R7 463 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 ZNF180Q9UJW8 692 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CHMP2BQ9UQN3 213 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 DAAM1Q9Y4D1 1078 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 GSTA1P08263 222 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 VARSP26640 1264 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 BYSLQ13895 437 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 IFI16Q16666 785 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 MFSD14BQ5SR56 506 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 TBC1D10CQ8IV04 446 aa12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-232ENST00000584168 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
CDK5RAP3-232ENST00000584168 A0A1W2PQ27 194 aa12.93□□□□□ -0.34
CDK5RAP3-232ENST00000584168 A0A1W2PQ64 194 aa12.93□□□□□ -0.34
CDK5RAP3-232ENST00000584168 A0A1W2PQD8 194 aa12.93□□□□□ -0.34
CDK5RAP3-232ENST00000584168 GSG1L2A8MUP6 293 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms