RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 USP9XQ93008 2570 aaPredicted RBP12.88□□□□□ -0.35
CCDC47-206ENST00000584112 CFBP00751 764 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 MYL3P08590 195 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 CTNNB1P35222 781 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 ZNF200P98182 395 aaPredicted RBP12.88□□□□□ -0.35
CCDC47-206ENST00000584112 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 ARHGEF16Q5VV41 709 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 CATIPQ7Z7H3 387 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 UBALD2Q8IYN6 164 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 TBC1D5Q92609 795 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 TAAR1Q96RJ0 339 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
CCDC47-206ENST00000584112 MTA3Q9BTC8 594 aa12.88□□□□□ -0.35
CCDC47-206ENST00000584112 A6NJR5 290 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 LGR5O75473 907 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 CXCL10P02778 98 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 NPR3P17342 541 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 AOC1P19801 751 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 HSD17B4P51659 736 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
CCDC47-206ENST00000584112 GHRHRQ02643 423 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 TROAPQ12815 778 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 IKBKEQ14164 716 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 CASC1Q6TDU7 716 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 STOX1Q6ZVD7 989 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
CCDC47-206ENST00000584112 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
CCDC47-206ENST00000584112 SUSD6Q92537 303 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 YME1L1Q96TA2 773 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 COL20A1Q9P218 1284 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 SORCS3Q9UPU3 1222 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
CCDC47-206ENST00000584112 CACNA1IQ9P0X4 2223 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
CCDC47-206ENST00000584112 GH1P01241 217 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 EIF2AK2P19525 551 aaKnown RBP12.86□□□□□ -0.35
CCDC47-206ENST00000584112 RING1Q06587 406 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 SEPT14Q6ZU15 432 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 LRRC8DQ7L1W4 858 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 TMTC2Q8N394 836 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 COPS5Q92905 334 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 MAP3K14Q99558 947 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 PXMP2Q9NR77 195 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 TAF6LQ9Y6J9 622 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 IGSF10Q6WRI0 2623 aa12.86□□□□□ -0.35
CCDC47-206ENST00000584112 DMXL2Q8TDJ6 3036 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 PRR5-ARHGAP8B1AHC4 643 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 OPLAHO14841 1288 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 PPP1R11O60927 126 aaPredicted RBP12.85□□□□□ -0.35
CCDC47-206ENST00000584112 DDAH1O94760 285 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 ARIH2O95376 493 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 ASGR2P07307 311 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 NR3C2P08235 984 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 SELPP16109 830 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 ATF7P17544 494 aaPredicted RBP12.85□□□□□ -0.35
CCDC47-206ENST00000584112 KIF5BP33176 963 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 MCM5P33992 734 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 ANTXR2P58335 489 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 ARHGAP8P85298 464 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
CCDC47-206ENST00000584112 CAMK1Q14012 370 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 RBM23Q86U06 439 aaKnown RBP12.85□□□□□ -0.35
CCDC47-206ENST00000584112 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 CTCFLQ8NI51 663 aaPredicted RBP12.85□□□□□ -0.35
CCDC47-206ENST00000584112 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 DHX38Q92620 1227 aaKnown RBP12.85□□□□□ -0.35
CCDC47-206ENST00000584112 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 PIGSQ96S52 555 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 LSG1Q9H089 658 aaKnown RBP12.85□□□□□ -0.35
CCDC47-206ENST00000584112 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 SENP2Q9HC62 589 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
CCDC47-206ENST00000584112 WDFY3Q8IZQ1 3526 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 C1QTNF9BB2RNN3 333 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 GCOM1H8Y6P7 765 aaPredicted RBP12.84□□□□□ -0.35
CCDC47-206ENST00000584112 UPP2O95045 317 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 MMP3P08254 477 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 C1QTNF9P0C862 333 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 PMLP29590 882 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 NRIP1P48552 1158 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 LMNB2Q03252 620 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 ARHGAP1Q07960 439 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 LY6KQ17RY6 165 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 KCNV1Q6PIU1 500 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 EMID1Q96A84 441 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms