RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 COPS5Q92905 334 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 ATP6V0A1Q93050 837 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 GPR20Q99678 358 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 TNMDQ9H2S6 317 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 BCAS3Q9H6U6 928 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 ZSWIM4Q9H7M6 989 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 BLOC1S4Q9NUP1 217 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 HOOK1Q9UJC3 728 aaKnown RBP18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 EMSYQ7Z589 1322 aa18.72■□□□□ 0.59
CDK5RAP3-230ENST00000584042 IGKV6D-21A0A0A0MT36 114 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 NOP56O00567 594 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 ADCY3O60266 1144 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 SLITRK3O94933 977 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 QARSP47897 775 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 PSMC5P62195 406 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 SP4Q02446 784 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 TNFAIP2Q03169 654 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 CTTNQ14247 550 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 MAP3K21Q5TCX8 1036 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 SH3RF1Q7Z6J0 888 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 PPTC7Q8NI37 304 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 SEPT1Q8WYJ6 367 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 SPATA33Q96N06 139 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 PANK2Q9BZ23 570 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 KBTBD4Q9NVX7 518 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 RGL1Q9NZL6 768 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 FAM184BQ9ULE4 1060 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 KIAA1024Q9UPX6 916 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 Q9Y3F1 56 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 TRIM17Q9Y577 477 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 PCNTO95613 3336 aa18.71■□□□□ 0.59
CDK5RAP3-230ENST00000584042 CEP350Q5VT06 3117 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 GSTTP1A0A1W2PQM5 241 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 ADCY6O43306 1168 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SORBS3O60504 671 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 LGR5O75473 907 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 MYL1P05976 194 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 HOXD8P13378 290 aaPredicted RBP18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PRAMEF19Q5SWL8 479 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 KCNK18Q7Z418 384 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 CCDC60Q8IWA6 550 aaPredicted RBP18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TRPV1Q8NER1 839 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 OR6J1Q8NGC5 347 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 AFAP1L1Q8TED9 768 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PLIN2Q99541 437 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 FRMPD3Q5JV73 1810 aa18.7■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PRKAR2AP13861 404 aaKnown RBP18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 ELNP15502 786 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TCF7P36402 384 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 POSTNQ15063 836 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 UGCGQ16739 394 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 HSDL1Q3SXM5 330 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TMEM63BQ5T3F8 832 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 FAM160B1Q5W0V3 765 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TLK2Q86UE8 772 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TPH2Q8IWU9 490 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PAGE5Q96GU1 130 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 NACC1Q96RE7 527 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 WRAP73Q9P2S5 460 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 GABBR1Q9UBS5 961 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 DNM3Q9UQ16 869 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TELO2Q9Y4R8 837 aa18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 MAFBQ9Y5Q3 323 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-230ENST00000584042 BACH1O14867 736 aa18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SEPT4O43236 478 aa18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 LETM1O95202 739 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 EYA4O95677 639 aa18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 HSPA8P11142 646 aaKnown RBP18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 CACNB2Q08289 660 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 ZSCAN23Q3MJ62 389 aa18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 ZNF302Q9NR11 478 aa18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
CDK5RAP3-230ENST00000584042 E9PMD0 336 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 GTPBP6O43824 516 aaPredicted RBP18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 DUSP11O75319 330 aaKnown RBP18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 MMP3P08254 477 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PLA2G4BP0C869 781 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 AMPD3Q01432 767 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PRKCEQ02156 737 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TRIM32Q13049 653 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 CAMK4Q16566 473 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SV2BQ7L1I2 683 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PCYT2Q99447 389 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 MTRQ99707 1265 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 LRRC27Q9C0I9 530 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 DBR1Q9UK59 544 aaKnown RBP18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 HTTP42858 3142 aa18.67■□□□□ 0.58
CDK5RAP3-230ENST00000584042 FOXN1O15353 648 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 ZNF862O60290 1169 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PTGS1P23219 599 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 YWHABP31946 246 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 GRK4P32298 578 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SLC26A2P50443 739 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SLC12A3P55017 1021 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms