RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 EXOC3O60645 756 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 PPP2R2AP63151 447 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 KCNK18Q7Z418 384 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 NSRP1Q9H0G5 558 aaKnown RBP11.53□□□□□ -0.56
RNF43-207ENST00000583753 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 AZI2Q9H6S1 392 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 EEF2P13639 858 aaKnown RBP11.53□□□□□ -0.56
RNF43-207ENST00000583753 LRRC63Q05C16 580 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 MIIPQ5JXC2 388 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 HOOK3Q86VS8 718 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 WDR66Q8TBY9 1149 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 RAD54LQ92698 747 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 CUL5Q93034 780 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 CEP72Q9P209 647 aa11.53□□□□□ -0.56
RNF43-207ENST00000583753 RPL13P26373 211 aaKnown RBP11.52□□□□□ -0.56
RNF43-207ENST00000583753 GCKP35557 465 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 RCAN1P53805 252 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 CACNB3P54284 484 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 MTMR3Q13615 1198 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 GRM4Q14833 912 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 NSMFQ6X4W1 530 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 GSTA5Q7RTV2 222 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 SPICE1Q8N0Z3 855 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 GUF1Q8N442 669 aaKnown RBP11.52□□□□□ -0.56
RNF43-207ENST00000583753 FAM167BQ9BTA0 163 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 NUCKS1Q9H1E3 243 aaKnown RBP11.52□□□□□ -0.56
RNF43-207ENST00000583753 IL17RBQ9NRM6 502 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 PCDHA1Q9Y5I3 950 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 RGPD2P0DJD1 1756 aa11.52□□□□□ -0.56
RNF43-207ENST00000583753 LAD1O00515 517 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 MYL1P05976 194 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SCP2P22307 547 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 FGFR4P22455 802 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SESN3P58005 492 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SFR1Q86XK3 245 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 PARP9Q8IXQ6 854 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 KIF2BQ8N4N8 673 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SEC16BQ96JE7 1060 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 C7orf25Q9BPX7 421 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SH2D3AQ9BRG2 576 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 BHMT2Q9H2M3 363 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 MAD2L2Q9UI95 211 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 AFPP02771 609 aaKnown RBP11.52□□□□□ -0.57
RNF43-207ENST00000583753 TRIM49P0CI25 452 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 TRIM49CP0CI26 452 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SLURP2P0DP57 97 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 HOXA13P31271 388 aaPredicted RBP11.52□□□□□ -0.57
RNF43-207ENST00000583753 ERVK-9P63128 1117 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SP4Q02446 784 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 GRB10Q13322 594 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 NPY5RQ15761 445 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SLC18A3Q16572 532 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 MEA1Q16626 185 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 HP1BP3Q5SSJ5 553 aaPredicted RBP11.52□□□□□ -0.57
RNF43-207ENST00000583753 SEL1L2Q5TEA6 688 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.57
RNF43-207ENST00000583753 RIC8AQ9NPQ8 531 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 SWAP70Q9UH65 585 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 DBR1Q9UK59 544 aaKnown RBP11.52□□□□□ -0.57
RNF43-207ENST00000583753 SUFUQ9UMX1 484 aa11.52□□□□□ -0.57
RNF43-207ENST00000583753 OPLAHO14841 1288 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 CFBP00751 764 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
RNF43-207ENST00000583753 C12orf60Q5U649 245 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 FAM47EQ6ZV65 393 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 BSDC1Q9NW68 430 aaPredicted RBP11.51□□□□□ -0.57
RNF43-207ENST00000583753 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 USTQ9Y2C2 406 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 ORC4O43929 436 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 ERFP50548 548 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 DR1Q01658 176 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 PLCB3Q01970 1234 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 CDC37Q16543 378 aaPredicted RBP11.51□□□□□ -0.57
RNF43-207ENST00000583753 GLE1Q53GS7 698 aaKnown RBP11.51□□□□□ -0.57
RNF43-207ENST00000583753 RNF10Q8N5U6 811 aaKnown RBP11.51□□□□□ -0.57
RNF43-207ENST00000583753 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 USP38Q8NB14 1042 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 PSMD1Q99460 953 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 PPP1R12CQ9BZL4 782 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 ZMYND12Q9H0C1 365 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 RAB17Q9H0T7 212 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 CALUO43852 315 aaPredicted RBP11.51□□□□□ -0.57
RNF43-207ENST00000583753 TAL1P17542 331 aaPredicted RBP11.51□□□□□ -0.57
RNF43-207ENST00000583753 NUGGCQ68CJ6 796 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 CCDC127Q96BQ5 260 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 FRMD4BQ9Y2L6 1034 aa11.51□□□□□ -0.57
RNF43-207ENST00000583753 PCP11498 1178 aaKnown RBP11.5□□□□□ -0.57
RNF43-207ENST00000583753 KCNJ1P48048 391 aa11.5□□□□□ -0.57
RNF43-207ENST00000583753 CETN1Q12798 172 aa11.5□□□□□ -0.57
RNF43-207ENST00000583753 CTTNQ14247 550 aaKnown RBP11.5□□□□□ -0.57
RNF43-207ENST00000583753 TBC1D9BQ66K14 1250 aa11.5□□□□□ -0.57
RNF43-207ENST00000583753 GALNT17Q6IS24 598 aa11.5□□□□□ -0.57
RNF43-207ENST00000583753 RCSD1Q6JBY9 416 aa11.5□□□□□ -0.57
RNF43-207ENST00000583753 SLC51AQ86UW1 340 aa11.5□□□□□ -0.57
RNF43-207ENST00000583753 SPATS2Q86XZ4 545 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms