RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	ZNF577	Q9BSK1	485 aa		13.42	□□□□□ -0.26
STRADA-222	ENST00000583085	UNC45A	Q9H3U1	944 aa		13.42	□□□□□ -0.26
STRADA-222	ENST00000583085	FEM1B	Q9UK73	627 aa		13.42	□□□□□ -0.26
STRADA-222	ENST00000583085	MRPL11	Q9Y3B7	192 aa	Known RBP	13.42	□□□□□ -0.26
STRADA-222	ENST00000583085	FGFR1OP	O95684	399 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	ALAS1	P13196	640 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	PTGER2	P43116	358 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	MUM1L1	Q5H9M0	696 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	RINT1	Q6NUQ1	792 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	CNPY4	Q8N129	248 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	BAP1	Q92560	729 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	NAPG	Q99747	312 aa	Predicted RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	SYNPO2	Q9UMS6	1093 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	NOL4	O94818	638 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	GCNT3	O95395	438 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	ITGB5	P18084	799 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	NMT1	P30419	496 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	EIF4A3	P38919	411 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	GMPS	P49915	693 aa	Predicted RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	RSRC2	Q7L4I2	434 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	JAKMIP2	Q96AA8	810 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	CCDC42	Q96M95	316 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	WDR11	Q9BZH6	1224 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	CDC23	Q9UJX2	597 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	PLAGL2	Q9UPG8	496 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	PITPNM2	Q9BZ72	1349 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	ATP1A1	P05023	1023 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	CASP4	P49662	377 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	ARID5A	Q03989	594 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	MTMR2	Q13614	643 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	MCTP2	Q6DN12	878 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	MAEA	Q7L5Y9	396 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	SLC16A10	Q8TF71	515 aa		13.41	□□□□□ -0.26
STRADA-222	ENST00000583085	DDX41	Q9UJV9	622 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-222	ENST00000583085		A0A1W2PQJ5	194 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	FIGN	Q5HY92	759 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	CACNA2D4	Q7Z3S7	1137 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	TRIM59	Q8IWR1	403 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	NEK11	Q8NG66	645 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	SLC5A5	Q92911	643 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	LSM14B	Q9BX40	385 aa	Known RBP	13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	HACL1	Q9UJ83	578 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	ACTN1	P12814	892 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	CYLC1	P35663	651 aa	Predicted RBP	13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	CHMP4BP1	P59074	171 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	FAM160B2	Q86V87	743 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	ANKRD13C	Q8N6S4	541 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	SH2D4A	Q9H788	454 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	KCNG1	Q9UIX4	513 aa		13.4	□□□□□ -0.26
STRADA-222	ENST00000583085	IPO5	O00410	1097 aa	Known RBP	13.4	□□□□□ -0.27
STRADA-222	ENST00000583085	FLOT1	O75955	427 aa		13.4	□□□□□ -0.27
STRADA-222	ENST00000583085	EYA4	O95677	639 aa		13.4	□□□□□ -0.27
STRADA-222	ENST00000583085	POLR2F	P61218	127 aa	Known RBP	13.4	□□□□□ -0.27
STRADA-222	ENST00000583085	COG2	Q14746	738 aa		13.4	□□□□□ -0.27
STRADA-222	ENST00000583085	CLEC4D	Q8WXI8	215 aa		13.4	□□□□□ -0.27
STRADA-222	ENST00000583085	MYH11	P35749	1972 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	TBCA	O75347	108 aa	Known RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	ICAM1	P05362	532 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	KIF11	P52732	1056 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	MAP3K10	Q02779	954 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	GFPT1	Q06210	699 aa	Predicted RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	KNOP1	Q1ED39	458 aa	Known RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	DEFB129	Q9H1M3	183 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	HAUS4	Q9H6D7	363 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	ST7	Q9NRC1	585 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	TMEM150B	A6NC51	233 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	EIF3CL	B5ME19	914 aa	Known RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	AKAP3	O75969	853 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	TGFB2	P61812	414 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	PPP2R5C	Q13362	524 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	SRGAP1	Q7Z6B7	1085 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	MYCT1	Q8N699	235 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	DRC1	Q96MC2	740 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	EIF3C	Q99613	913 aa	Known RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	PARD6B	Q9BYG5	372 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	DEF6	Q9H4E7	631 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	MLXIP	Q9HAP2	919 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	RNF216	Q9NWF9	866 aa	Predicted RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	CNOT7	Q9UIV1	285 aa	Known RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	ASTN1	O14525	1302 aa		13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	BRCA1	P38398	1863 aa	Known RBP	13.39	□□□□□ -0.27
STRADA-222	ENST00000583085	TLR2	O60603	784 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	KCNH2	Q12809	1159 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	PLS1	Q14651	629 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	CAPZA3	Q96KX2	299 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	LXN	Q9BS40	222 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	KCNH7	Q9NS40	1196 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	EIF2AK2	P19525	551 aa	Known RBP	13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	KRT83	P78385	493 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	AMPD2	Q01433	879 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	SPP2	Q13103	211 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	C1orf186	Q6ZWK4	172 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	PRPF38A	Q8NAV1	312 aa	Known RBP	13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	CEP63	Q96MT8	703 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms