RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 CHMP4CQ96CF2 233 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 CTAGE1Q96RT6 745 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 SLF1Q9BQI6 1058 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 AP5M1Q9H0R1 490 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 RBSNQ9H1K0 784 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 TSPY26PQ9H489 355 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 DCP1AQ9NPI6 582 aaPredicted RBP8.53□□□□□ -1.04
NF1-222ENST00000582892 CLDND1Q9NY35 253 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 FPGT-TNNI3KV9GXZ4 949 aa8.53□□□□□ -1.04
NF1-222ENST00000582892 PRR23AA6NEV1 266 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 CSPG5O95196 566 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 GJB5O95377 273 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 PDGFBP01127 241 aaPredicted RBP8.52□□□□□ -1.05
NF1-222ENST00000582892 CHGBP05060 677 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 MYL3P08590 195 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 GTF2F1P35269 517 aaKnown RBP eCLIP8.52□□□□□ -1.05
NF1-222ENST00000582892 TERF1P54274 439 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 PURAQ00577 322 aaKnown RBP8.52□□□□□ -1.05
NF1-222ENST00000582892 NR1H3Q13133 447 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 CCDC183Q5T5S1 534 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 RPAINQ86UA6 219 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 PABPC5Q96DU9 382 aaKnown RBP8.52□□□□□ -1.05
NF1-222ENST00000582892 MRPL38Q96DV4 380 aaKnown RBP8.52□□□□□ -1.05
NF1-222ENST00000582892 HAUS7Q99871 368 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 FSD1Q9BTV5 496 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 CCDC8Q9H0W5 538 aaPredicted RBP8.52□□□□□ -1.05
NF1-222ENST00000582892 PRKAG3Q9UGI9 489 aa8.52□□□□□ -1.05
NF1-222ENST00000582892 RALGAPA2Q2PPJ7 1873 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 LINC01565O15544 149 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 MBTPS2O43462 519 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 NBNO60934 754 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 BAIAP3O94812 1187 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 HMGB1P09429 215 aaKnown RBP8.51□□□□□ -1.05
NF1-222ENST00000582892 RPS6KB1P23443 525 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 GJB2P29033 226 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 RFC2P35250 354 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 COPB2P35606 906 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 ID4P47928 161 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 CDK8P49336 464 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 CHMP4BP1P59074 171 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 DHX9Q08211 1270 aaKnown RBP8.51□□□□□ -1.05
NF1-222ENST00000582892 NNTQ13423 1086 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 SMAD2Q15796 467 aaKnown RBP8.51□□□□□ -1.05
NF1-222ENST00000582892 CCDC158Q5M9N0 1113 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 BLOC1S2Q6QNY1 142 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 BMP8AQ7Z5Y6 402 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 FBXL6Q8N531 539 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 DHX38Q92620 1227 aaKnown RBP8.51□□□□□ -1.05
NF1-222ENST00000582892 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 RAD9AQ99638 391 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 SH2D4AQ9H788 454 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 HELLSQ9NRZ9 838 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 CCDC39Q9UFE4 941 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 NOL7Q9UMY1 257 aaKnown RBP8.51□□□□□ -1.05
NF1-222ENST00000582892 MTMR6Q9Y217 621 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 PKD1L2Q7Z442 2459 aa8.51□□□□□ -1.05
NF1-222ENST00000582892 TCHHQ07283 1943 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 KIAA1671Q9BY89 1806 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 A0A0D9SFI3 127 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 SYCE3A1L190 88 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 ZNF500O60304 480 aaPredicted RBP8.5□□□□□ -1.05
NF1-222ENST00000582892 TBX10O75333 385 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 NDUFB10O96000 172 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 SUPT20HL2P0C7V6 817 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 ZXDAP98168 799 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 LRRFIP1Q32MZ4 808 aaKnown RBP8.5□□□□□ -1.05
NF1-222ENST00000582892 ADCK5Q3MIX3 580 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 EPC2Q52LR7 807 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.5□□□□□ -1.05
NF1-222ENST00000582892 ERMP1Q7Z2K6 904 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 SUGP1Q8IWZ8 645 aaKnown RBP8.5□□□□□ -1.05
NF1-222ENST00000582892 KBTBD3Q8NAB2 608 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 RETREG2Q8NC44 543 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 FAM227BQ96M60 508 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 CRNKL1Q9BZJ0 848 aaKnown RBP8.5□□□□□ -1.05
NF1-222ENST00000582892 ARMT1Q9H993 441 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 SLC38A10Q9HBR0 1119 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 A1CFQ9NQ94 594 aaKnown RBP8.5□□□□□ -1.05
NF1-222ENST00000582892 MYH7P12883 1935 aa8.5□□□□□ -1.05
NF1-222ENST00000582892 MYO10Q9HD67 2058 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 STXBP3O00186 592 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 ATP2A1O14983 1001 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 ZEB2O60315 1214 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 ARP10275 920 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 PDE6AP16499 860 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 MSNP26038 577 aaKnown RBP8.49□□□□□ -1.05
NF1-222ENST00000582892 SNAP25P60880 206 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 HYAL1Q12794 435 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 MBTPS1Q14703 1052 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 ME3Q16798 604 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 MCMDC2Q4G0Z9 681 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 TIGD5Q53EQ6 642 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 RASGRP2Q7LDG7 609 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 CCDC83Q8IWF9 413 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 STK11IPQ8N1F8 1099 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 FBXL16Q8N461 479 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 HPS1Q92902 700 aa8.49□□□□□ -1.05
NF1-222ENST00000582892 COPS5Q92905 334 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms