RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZSWIM2Q8NEG5 633 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TRERF1Q96PN7 1200 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 COL20A1Q9P218 1284 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SAR1BQ9Y6B6 198 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZSCAN5CA6NGD5 496 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 EIF3CLB5ME19 914 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 GCNT3O95395 438 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 INPP5BP32019 993 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SECISBP2LQ93073 1101 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 EIF3CQ99613 913 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TSG101Q99816 390 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 HAUS4Q9H6D7 363 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PLAGL2Q9UPG8 496 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PEX10O60683 326 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 STAT2P52630 851 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 VAV2P52735 878 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 FAM193AP78312 1265 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 FKBP3Q00688 224 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 KCNH2Q12809 1159 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CC2D2BQ6DHV5 1058 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CEP112Q8N8E3 955 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 WNK4Q96J92 1243 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ADAMTS1Q9UHI8 967 aa11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDK5RAP3-225ENST00000582482 A0A087X0T9 212 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NFIBO00712 420 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 FAM228BP0C875 321 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SREBF1P36956 1147 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 KIF5AQ12840 1032 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 STYK1Q6J9G0 422 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DLK2Q6UY11 383 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SH2D4AQ9H788 454 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ASTN1O14525 1302 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 KRT86O43790 486 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TRIM49P0CI25 452 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TRIM49CP0CI26 452 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MAGEA1P43355 309 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 LRRC63Q05C16 580 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DLGAP5Q15398 846 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SPA17Q15506 151 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TRADDQ15628 312 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 HDAC9Q9UKV0 1011 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 HYOU1Q9Y4L1 999 aa11.79□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ESYT3A0FGR9 886 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 GCFC2P16383 781 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 USP11P51784 963 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 KRT83P78385 493 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 HYIQ5T013 277 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 POTEAQ6S8J7 498 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 GMCL1P1Q8NEA9 526 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CHORDC1Q9UHD1 332 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CYP3A7-CYP3A51PA0A087WV96 503 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TMCO5BA8MYB1 307 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SLITRK3O94933 977 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 IPO7O95373 1038 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CYP3A7P24462 503 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 KLRC1P26715 233 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NT5C2P49902 561 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CYP2J2P51589 502 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 WHAMMP3Q1A5X7 153 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SKIDA1Q1XH10 827 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MSANTD4Q8NCY6 345 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MBOAT7Q96N66 472 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 LRRC1Q9BTT6 524 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NUP58Q9BVL2 599 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 WDR11Q9BZH6 1224 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DMGDHQ9UI17 866 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZBTB7AO95365 584 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 KCNA3P22001 575 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CREG2Q8IUH2 290 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 MYCT1Q8N699 235 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 CNKSR1Q969H4 720 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ZNF341Q9BYN7 854 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 NT5C3AQ9H0P0 336 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 VPS18Q9P253 973 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RGS17Q9UGC6 210 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 FAN1Q9Y2M0 1017 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 RABGAP1Q9Y3P9 1069 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 KDM3AQ9Y4C1 1321 aa11.77□□□□□ -0.53
CDK5RAP3-225ENST00000582482 ABCB7O75027 752 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms