RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CD44P16070 742 aaKnown RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 CCNE1P24864 410 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 RGS2P41220 211 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 MUM1L1Q5H9M0 696 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 PCNX4Q63HM2 1172 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 ADSSL1Q8N142 457 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 NEK9Q8TD19 979 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 SYTL5Q8TDW5 730 aaPredicted RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 NSUN6Q8TEA1 469 aaKnown RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 CLEC4DQ8WXI8 215 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 RMDN3Q96TC7 470 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 RIT2Q99578 217 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 EIF2AK1Q9BQI3 630 aaKnown RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 TEX13BQ9BXU2 312 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 THAP9Q9H5L6 903 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 ACAD9Q9H845 621 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 SLC39A2Q9NP94 309 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 SAMSN1Q9NSI8 373 aaKnown RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 TBC1D22BQ9NU19 505 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 FBXO40Q9UH90 709 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 NRBP1Q9UHY1 535 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 GDAQ9Y2T3 454 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 COL11A1P12107 1806 aaPredicted RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 PARP14Q460N5 1801 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 ZNF536O15090 1300 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 PLXNB2O15031 1838 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 POTEB3A0JP26 581 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 POTEFA5A3E0 1075 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 KCNJ18B7U540 433 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 MEIS1O00470 390 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 KLRC4O43908 158 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 ZNF500O60304 480 aaPredicted RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 INHAP05111 366 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 GJB1P08034 283 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 CCL5P13501 91 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 EIF2AK2P19525 551 aaKnown RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 CYP2B6P20813 491 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 MUTP22033 750 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 COPB2P35606 906 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 RPS6P62753 249 aaKnown RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 PPP2R5CQ13362 524 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 MTMR1Q13613 665 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 BAATQ14032 418 aaPredicted RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 KCNJ12Q14500 433 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 EPHA7Q15375 998 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 HERC4Q5GLZ8 1057 aaPredicted RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 POTEBQ6S5H4 581 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 GPR142Q7Z601 462 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 CATSPER3Q86XQ3 398 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 CSGALNACT2Q8N6G5 542 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 CHST13Q8NET6 341 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 SLC5A5Q92911 643 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 P2RX5Q93086 422 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 NACC1Q96RE7 527 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 TAAR1Q96RJ0 339 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 SRRTQ9BXP5 876 aaKnown RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 TXNRD2Q9NNW7 524 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 RRAGDQ9NQL2 400 aaPredicted RBP10.31□□□□□ -0.76
SS18-220ENST00000582092 BLOC1S4Q9NUP1 217 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 PKD2L1Q9P0L9 805 aa10.31□□□□□ -0.76
SS18-220ENST00000582092 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.76
SS18-220ENST00000582092 IGLV3-22A0A075B6J6 115 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 SLC15A5A6NIM6 579 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 DDX39AO00148 427 aaKnown RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 MAFGO15525 162 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 CCP110O43303 1012 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 MED24O75448 989 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 FAM13AO94988 1023 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 EYA4O95677 639 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 SLC25A27O95847 323 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 SKILP12757 684 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 PRKCSHP14314 528 aaPredicted RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 ELNP15502 786 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 EN2P19622 333 aaPredicted RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 EEF1GP26641 437 aaKnown RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 MTIF2P46199 727 aaKnown RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 CYP4A11Q02928 519 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 Q3C1V9 767 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 GNPTABQ3T906 1256 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 FAM26FQ5R3K3 315 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 POTEEQ6S8J3 1075 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 STXBP4Q6ZWJ1 553 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 VSTM4Q8IW00 320 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 LRRC8AQ8IWT6 810 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 MYOCDQ8IZQ8 938 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 ANKRD35Q8N283 1001 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 SHCBP1Q8NEM2 672 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 CYP2W1Q8TAV3 490 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 DYDC2Q96IM9 177 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 CDHR1Q96JP9 859 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 APBA2Q99767 749 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms