RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 PRDM12Q9H4Q4 367 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 TBC1D22BQ9NU19 505 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 POLR3EQ9NVU0 708 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 TBX21Q9UL17 535 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 MOXD2PA6NHM9 499 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 A6NJR5 290 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 TBX3O15119 743 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 TIMP1P01033 207 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 ARP10275 920 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 ACRP10323 421 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 SP2Q02086 613 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 RILPL1Q5EBL4 403 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 LENG9Q96B70 501 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 SPATA33Q96N06 139 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 TOX2Q96NM4 488 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 RIT2Q99578 217 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 JPH1Q9HDC5 661 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 STARD7Q9NQZ5 370 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 PKD2L1Q9P0L9 805 aa15.2■□□□□ 0.02
CSNK1D-220ENST00000581737 EDIL3O43854 480 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 MARCH6O60337 910 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 NEMFO60524 1076 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 CABYRO75952 493 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 CCDC85BQ15834 202 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 DGKDQ16760 1214 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 TTC38Q5R3I4 469 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 TMEM240Q5SV17 173 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 TMEM63BQ5T3F8 832 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 CCDC183Q5T5S1 534 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 CYFIP1Q7L576 1253 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 AFG1LQ8WV93 481 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 SLC9A2Q9UBY0 812 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 TCHHQ07283 1943 aa15.19■□□□□ 0.02
CSNK1D-220ENST00000581737 CTAGE5O15320 804 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 MSH4O15457 936 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 SLC37A4O43826 429 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 GAS7O60861 476 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 ATP9AO75110 1047 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 YEATS4O95619 227 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 MMP3P08254 477 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 CSF2RAP15509 400 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 ATP2B1P20020 1258 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 MRE11P49959 708 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 ZNF445P59923 1031 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 BEX3Q00994 111 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 KRT76Q01546 638 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 ITGB3BPQ13352 177 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 KCNA10Q16322 511 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 MFSD5Q6N075 450 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 SLFN12Q8IYM2 578 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 LEO1Q8WVC0 666 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 ANP32BQ92688 251 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 SLC5A5Q92911 643 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 NECAB3Q96P71 396 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 ASB2Q96Q27 587 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 TEKT3Q9BXF9 490 aa15.18■□□□□ 0.02
CSNK1D-220ENST00000581737 DCDC2CA8MYV0 355 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 PPFIA4O75335 1185 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 HOXD8P13378 290 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 MCM7P33993 719 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 CDK7P50613 346 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 CALCRLQ16602 461 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 ZNF746Q6NUN9 644 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 ETNPPLQ8TBG4 499 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 GPT2Q8TD30 523 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 ADAMTS19Q8TE59 1207 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 GLT1D1Q96MS3 346 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 GDPD2Q9HCC8 539 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-220ENST00000581737 SORBS3O60504 671 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 BMP15O95972 392 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 ASGR1P07306 291 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 MYL3P08590 195 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 PTGS1P23219 599 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 SP4Q02446 784 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 STK38Q15208 465 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 ZSCAN23Q3MJ62 389 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 HSDL1Q3SXM5 330 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 CCDC73Q6ZRK6 1079 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 ZNF365Q70YC5 407 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 SMAP1Q8IYB5 467 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 ATXN2LQ8WWM7 1075 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 SEPT1Q8WYJ6 367 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 GPR20Q99678 358 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 KATNAL1Q9BW62 490 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 SEZ6LQ9BYH1 1024 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 CEP131Q9UPN4 1083 aa15.16■□□□□ 0.02
CSNK1D-220ENST00000581737 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 WDR64B1ANS9 1081 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms