RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 COL4A6Q14031 1691 aa23.86■■□□□ 1.41
CCDC42-203ENST00000581598 PRPF3O43395 683 aaKnown RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 EVCP57679 992 aa23.86■■□□□ 1.41
CCDC42-203ENST00000581598 MRPS5P82675 430 aaKnown RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 HTRA4P83105 476 aaPredicted RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 CCDC12Q8WUD4 166 aaPredicted RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 CRYGNQ8WXF5 182 aa23.86■■□□□ 1.41
CCDC42-203ENST00000581598 TNPO1Q92973 898 aaKnown RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 ASB2Q96Q27 587 aa23.86■■□□□ 1.41
CCDC42-203ENST00000581598 TGS1Q96RS0 853 aaKnown RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 ZMYND12Q9H0C1 365 aa23.86■■□□□ 1.41
CCDC42-203ENST00000581598 AGO4Q9HCK5 861 aaKnown RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 TMEM260Q9NX78 707 aa23.86■■□□□ 1.41
CCDC42-203ENST00000581598 TUBE1Q9UJT0 475 aa23.86■■□□□ 1.41
CCDC42-203ENST00000581598 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
CCDC42-203ENST00000581598 LINC01553A4QN01 128 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 RRN3P2A6NIE6 340 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 LPXNO60711 386 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 ATG7O95352 703 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 CYP3A4P08684 503 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 ARP10275 920 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 MGAT3Q09327 533 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 GRB10Q13322 594 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 MARCH8Q5T0T0 291 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 RUFY4Q6ZNE9 571 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 PLPPR4Q7Z2D5 763 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 SPRED2Q7Z698 418 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 RSPH3Q86UC2 560 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 MYOCDQ8IZQ8 938 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 SP7Q8TDD2 431 aaPredicted RBP23.85■■□□□ 1.41
CCDC42-203ENST00000581598 OSBPL7Q9BZF2 842 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 AZI2Q9H6S1 392 aa23.85■■□□□ 1.41
CCDC42-203ENST00000581598 CHRNA1P02708 482 aa23.84■■□□□ 1.41
CCDC42-203ENST00000581598 MARK3P27448 753 aa23.84■■□□□ 1.41
CCDC42-203ENST00000581598 ACTR2P61160 394 aa23.84■■□□□ 1.41
CCDC42-203ENST00000581598 ITGB3BPQ13352 177 aaPredicted RBP23.84■■□□□ 1.41
CCDC42-203ENST00000581598 PKN1Q16512 942 aa23.84■■□□□ 1.41
CCDC42-203ENST00000581598 MICALL1Q8N3F8 863 aa23.84■■□□□ 1.41
CCDC42-203ENST00000581598 TOP1MTQ969P6 601 aa23.84■■□□□ 1.41
CCDC42-203ENST00000581598 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.83■■□□□ 1.41
CCDC42-203ENST00000581598 NTRK3Q16288 839 aa23.83■■□□□ 1.41
CCDC42-203ENST00000581598 IFIH1Q9BYX4 1025 aaKnown RBP23.83■■□□□ 1.41
CCDC42-203ENST00000581598 C6orf50Q9HD87 102 aa23.83■■□□□ 1.41
CCDC42-203ENST00000581598 IGKV6D-21A0A0A0MT36 114 aa23.82■■□□□ 1.4
CCDC42-203ENST00000581598 INSRRP14616 1297 aa23.82■■□□□ 1.4
CCDC42-203ENST00000581598 ZNF76P36508 570 aa23.82■■□□□ 1.4
CCDC42-203ENST00000581598 SLC26A2P50443 739 aa23.82■■□□□ 1.4
CCDC42-203ENST00000581598 STAT5BP51692 787 aa23.82■■□□□ 1.4
CCDC42-203ENST00000581598 JAKMIP3Q5VZ66 844 aa23.82■■□□□ 1.4
CCDC42-203ENST00000581598 FAM117BQ6P1L5 589 aa23.82■■□□□ 1.4
CCDC42-203ENST00000581598 RNF26Q9BY78 433 aaPredicted RBP23.82■■□□□ 1.4
CCDC42-203ENST00000581598 IGLV3-22A0A075B6J6 115 aa23.81■■□□□ 1.4
CCDC42-203ENST00000581598 IFNAR1P17181 557 aa23.81■■□□□ 1.4
CCDC42-203ENST00000581598 GNA11P29992 359 aa23.81■■□□□ 1.4
CCDC42-203ENST00000581598 DNAJB3Q8WWF6 145 aa23.81■■□□□ 1.4
CCDC42-203ENST00000581598 BACH2Q9BYV9 841 aa23.81■■□□□ 1.4
CCDC42-203ENST00000581598 SUGCTQ9HAC7 445 aa23.81■■□□□ 1.4
CCDC42-203ENST00000581598 FAM86B1E9PN63 330 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 FAM86B2P0C5J1 330 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 PLCB4Q15147 1175 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 AAK1Q2M2I8 961 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 KRT40Q6A162 431 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 RUFY3Q7L099 469 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 PLA2G4DQ86XP0 818 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 REXO1Q8N1G1 1221 aaKnown RBP23.8■■□□□ 1.4
CCDC42-203ENST00000581598 SAMD11Q96NU1 681 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 ZSWIM6Q9HCJ5 1215 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 COG5Q9UP83 839 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 PCDHA2Q9Y5H9 948 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 SQORQ9Y6N5 450 aa23.8■■□□□ 1.4
CCDC42-203ENST00000581598 NCOR1O75376 2440 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 RBAK-RBAKDNI3L0D1 243 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 DHX15O43143 795 aaKnown RBP23.79■■□□□ 1.4
CCDC42-203ENST00000581598 GHRP10912 638 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 PDIA3P30101 505 aaKnown RBP23.79■■□□□ 1.4
CCDC42-203ENST00000581598 MRPS6P82932 125 aaKnown RBP23.79■■□□□ 1.4
CCDC42-203ENST00000581598 SETQ01105 290 aaPredicted RBP23.79■■□□□ 1.4
CCDC42-203ENST00000581598 AKAP17AQ02040 695 aaKnown RBP23.79■■□□□ 1.4
CCDC42-203ENST00000581598 LPIN1Q14693 890 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 FBXO47Q5MNV8 452 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 ABHD15Q6UXT9 468 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 CCDC148Q8NFR7 591 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 BICD2Q8TD16 824 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 GDPD5Q8WTR4 605 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 TRPC6Q9Y210 931 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 RALGAPA2Q2PPJ7 1873 aa23.79■■□□□ 1.4
CCDC42-203ENST00000581598 TTC3P53804 2025 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 CCNE2O96020 404 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 IGBP1P78318 339 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 IER5Q5VY09 327 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 TSHZ1Q6ZSZ6 1077 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 PHKBQ93100 1093 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 TM6SF1Q9BZW5 370 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 CDY2AQ9Y6F7 541 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 NLRC5Q86WI3 1866 aa23.78■■□□□ 1.4
CCDC42-203ENST00000581598 POTEB3A0JP26 581 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 IPO5O00410 1097 aaKnown RBP23.77■■□□□ 1.4
CCDC42-203ENST00000581598 ADAMTS3O15072 1205 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 CIITAP33076 1130 aa23.77■■□□□ 1.4
CCDC42-203ENST00000581598 TOB2Q14106 344 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms