RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 AAASQ9NRG9 546 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 FRYQ5TBA9 3013 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 KRBA1A5PL33 1030 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 CT47B1P0C2W7 299 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 RFX1P22670 979 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 MGAT3Q09327 533 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 NPAS4Q8IUM7 802 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 ZDHHC14Q8IZN3 488 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 CA14Q9ULX7 337 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 USP18Q9UMW8 372 aa16.5■□□□□ 0.23
CSNK1D-213ENST00000580446 ZIC2O95409 532 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 HOXB8P17481 243 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 ATP5JP18859 108 aa16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 PPARAQ07869 468 aa16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 FBXO47Q5MNV8 452 aa16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 VARS2Q5ST30 1063 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 ZC3H14Q6PJT7 736 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 IL31RAQ8NI17 732 aa16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 PCDHB12Q9Y5F1 795 aa16.49■□□□□ 0.23
CSNK1D-213ENST00000580446 EIF3JO75822 258 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 NR3C2P08235 984 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 PBX3P40426 434 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 ZSCAN25Q6NSZ9 544 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 ITPRIPQ8IWB1 547 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 COLGALT1Q8NBJ5 622 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 RSAD2Q8WXG1 361 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 NECTIN4Q96NY8 510 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 TBC1D17Q9HA65 648 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 HCFC2Q9Y5Z7 792 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 CDY2AQ9Y6F7 541 aa16.48■□□□□ 0.23
CSNK1D-213ENST00000580446 TBKBP1A7MCY6 615 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 RANBP6O60518 1105 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 LRRN2O75325 713 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 CA8P35219 290 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 UBE3AQ05086 875 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 DMWDQ09019 674 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 TDGQ13569 410 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 DNAJB3Q8WWF6 145 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 UBA5Q9GZZ9 404 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 PXMP2Q9NR77 195 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 DUSP12Q9UNI6 340 aa16.47■□□□□ 0.23
CSNK1D-213ENST00000580446 WDR19Q8NEZ3 1342 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 ZZEF1O43149 2961 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 KINO60870 393 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 EOMESO95936 686 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 SCG2P13521 617 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 MTHFRP42898 656 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 ADAM17P78536 824 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 SP4Q02446 784 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 FAM102BQ5T8I3 360 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 CASP10Q92851 521 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 IWS1Q96ST2 819 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 TMEM47Q9BQJ4 181 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 RTKNQ9BST9 563 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 PARD6AQ9NPB6 346 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 CYP26B1Q9NR63 512 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 LRFN2Q9ULH4 789 aa16.46■□□□□ 0.23
CSNK1D-213ENST00000580446 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.231e-6■■■■□ 21.8
CSNK1D-213ENST00000580446 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 TTC3P53804 2025 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 ANP32CO43423 234 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 RLBP1P12271 317 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 LMNB2Q03252 620 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 C1orf210Q8IVY1 113 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 MAML2Q8IZL2 1156 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 RASGRP4Q8TDF6 673 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 APPBP2Q92624 585 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 KCNK12Q9HB15 430 aa16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 TYW1Q9NV66 732 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-213ENST00000580446 SPEGQ15772 3267 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 FSD2A1L4K1 749 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 NOP56O00567 594 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 STAG3L1P0CL83 205 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 PDHBP11177 359 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 GNAT1P11488 350 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 GLULP15104 373 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 SDHBP21912 280 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 ITIH3Q06033 890 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 TMEM266Q2M3C6 531 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 TMC5Q6UXY8 1006 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 ST13P5Q8NFI4 369 aaPredicted RBP16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 NAPBQ9H115 298 aa16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 GCN1Q92616 2671 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-213ENST00000580446 FLNBO75369 2602 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 CLASP2O75122 1294 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 CFBP00751 764 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms