RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 EHD4Q9H223 541 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 ARRDC1-AS1Q9H2J1 176 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 VCPKMTQ9H867 229 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 GOPCQ9HD26 462 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 NGRNQ9NPE2 291 aaKnown RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 RAI14Q9P0K7 980 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 NXF1Q9UBU9 619 aaKnown RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 ADD3Q9UEY8 706 aaKnown RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 GTF2IRD1Q9UHL9 959 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 SAP30BPQ9UHR5 308 aaKnown RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 PALD1Q9ULE6 856 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 PPP1R9AQ9ULJ8 1098 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 RAXQ9Y2V3 346 aa2.88□□□□□ -1.95
CTC1-207ENST00000580299 MRPL42Q9Y6G3 142 aaKnown RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 COL5A1P20908 1838 aaPredicted RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 KIF26AQ9ULI4 1882 aaPredicted RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 URB1O60287 2271 aaKnown RBP2.88□□□□□ -1.95
CTC1-207ENST00000580299 MYH6P13533 1939 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 BAZ2AQ9UIF9 1905 aaKnown RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 PLXNB3Q9ULL4 1909 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 THADAQ6YHU6 1953 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 ASXL3Q9C0F0 2248 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 A6NJR5 290 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 SHISA7A6NL88 538 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 FAM170BA6NMN3 283 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 ELL2O00472 640 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 PER1O15534 1290 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 SLC28A2O43868 658 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 LRRN2O75325 713 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 DGKIO75912 1065 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 FGF18O76093 207 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 EPN2O95208 641 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 WEE2P0C1S8 567 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 LINC00271P0C7V0 271 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 GLULP15104 373 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 CASTP20810 708 aaKnown RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 USP5P45974 858 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 RPS9P46781 194 aaKnown RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 PFKPQ01813 784 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 ICA1Q05084 483 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 CALD1Q05682 793 aaKnown RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 SMC1AQ14683 1233 aaKnown RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 MBTPS1Q14703 1052 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 SEPT2Q15019 361 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 MLF2Q15773 248 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 ZNF423Q2M1K9 1284 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 CCDC27Q2M243 656 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 PAN2Q504Q3 1202 aaKnown RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 LRRC24Q50LG9 513 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 TAF1BQ53T94 588 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 COLEC12Q5KU26 742 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 ZNF574Q6ZN55 896 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 TMEM179Q6ZVK1 233 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 EEPD1Q7L9B9 569 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 RASGRP2Q7LDG7 609 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 CABP7Q86V35 215 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 SCUBE3Q8IX30 993 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 CPXCR1Q8N123 301 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 FAM160A2Q8N612 972 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 SCFD2Q8WU76 684 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 PPP1R13LQ8WUF5 828 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 FGD4Q96M96 766 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 MYADMQ96S97 322 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 TCF25Q9BQ70 676 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 SLF1Q9BQI6 1058 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 USP26Q9BXU7 913 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 CCDC8Q9H0W5 538 aaPredicted RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 ACAD9Q9H845 621 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 SFXN1Q9H9B4 322 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 LTB4R2Q9NPC1 389 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 TMEM9BQ9NQ34 198 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 SLC2A4RGQ9NR83 387 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 PDGFCQ9NRA1 345 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 VPS45Q9NRW7 570 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 TCP11L1Q9NUJ3 509 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 TMEM260Q9NX78 707 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 AATFQ9NY61 560 aaKnown RBP eCLIP2.87□□□□□ -1.95
CTC1-207ENST00000580299 ANKMY1Q9P2S6 941 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 CDH22Q9UJ99 828 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 LRFN2Q9ULH4 789 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 ADAMTS5Q9UNA0 930 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 LZTS1Q9Y250 596 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 PCDHGA5Q9Y5G8 931 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 APC2O95996 2303 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 PCNX2A6NKB5 2137 aa2.87□□□□□ -1.95
CTC1-207ENST00000580299 ASCC3Q8N3C0 2202 aaKnown RBP2.87□□□□□ -1.95
CTC1-207ENST00000580299 POLQO75417 2590 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 LOC102724159A0A0B4J2E5 919 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 TEX51A0A1B0GUA7 166 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 C4orf47A7E2U8 309 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 B4DLN1 442 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 B8ZZF3 427 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 FSCN2O14926 492 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 ATP2A1O14983 1001 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 AXIN1O15169 862 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 CFBP00751 764 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 CTSHP09668 335 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 FDX1P10109 184 aa2.86□□□□□ -1.95
CTC1-207ENST00000580299 LAG3P18627 525 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms