RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 ZNF512BQ96KM6 892 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 DHRS1Q96LJ7 313 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 SLC6A18Q96N87 628 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 SLC9A7Q96T83 725 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 TM9SF2Q99805 663 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 UTP14AQ9BVJ6 771 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 MKRN2Q9H000 416 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 ANXA1P04083 346 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 AFMP43652 599 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 RBM25P49756 843 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 FKBP1BP68106 108 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 GPSM2P81274 684 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 PROSER3Q2NL68 480 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 PARP10Q53GL7 1025 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 KIF6Q6ZMV9 814 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 NLRP10Q86W26 655 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 RASGRP4Q8TDF6 673 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 TMX4Q9H1E5 349 aaPredicted RBP8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 CTNND2Q9UQB3 1225 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 INPP5FQ9Y2H2 1132 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 LAMA2P24043 3122 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 ZSWIM8A7E2V4 1837 aa8.36□□□□□ -1.07
PPP4R1-216ENST00000580283 SHISA3A0PJX4 238 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 NBPF9Q3BBW0 867 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 CCDC81Q6ZN84 652 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 TTC6Q86TZ1 520 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 TMEM192Q8IY95 271 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 SLC17A8Q8NDX2 589 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 FAM168AQ92567 244 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 PTPN22Q9Y2R2 807 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 TRIM17Q9Y577 477 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
PPP4R1-216ENST00000580283 WTIPA6NIX2 430 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 H0YGN5 161 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 HTATSF1O43719 755 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 ERCC5P28715 1186 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 GDNFP39905 211 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 GJA8P48165 433 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 SOX9P48436 509 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 TAB3Q8N5C8 712 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 TBC1D16Q8TBP0 767 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 RTF1Q92541 710 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 ARMC5Q96C12 935 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 ACBD3Q9H3P7 528 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 TMEM59LQ9UK28 342 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 FBXL21Q9UKT6 434 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 FZD1Q9UP38 647 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 ZNF609O15014 1411 aa8.34□□□□□ -1.07
PPP4R1-216ENST00000580283 DNAJC25-GNG10A0A024R161 153 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 RAC2P15153 192 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 TCF3P15923 654 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 TXKP42681 527 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 LSRQ86X29 649 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 ZSWIM9Q86XI8 627 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 CD99L2Q8TCZ2 262 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 SYTL5Q8TDW5 730 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 CPLX3Q8WVH0 158 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 PRO3102Q9H379 93 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 MYOZ2Q9NPC6 264 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 SUCOQ9UBS9 1254 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 PCDHB12Q9Y5F1 795 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 EYSQ5T1H1 3165 aa8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 SPTBN5Q9NRC6 3674 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-216ENST00000580283 VCANP13611 3396 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 SSU72P8A0A1W2PR75 194 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 ACRP10323 421 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 GUCY2CP25092 1073 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 NASPP49321 788 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 HK2P52789 917 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 TCIRG1Q13488 830 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 SNW1Q13573 536 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 CNGB1Q14028 1251 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 KCNMB1Q16558 191 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 RALGPS1Q5JS13 557 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 RUFY4Q6ZNE9 571 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 TMC3Q7Z5M5 1100 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 CCDC144CPQ8IYA2 1237 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 DAGLBQ8NCG7 672 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 AGBL3Q8NEM8 1001 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 DHX38Q92620 1227 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 KIRREL1Q96J84 757 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 SRRTQ9BXP5 876 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 HDAC8Q9BY41 377 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 ADAMTS10Q9H324 1103 aa8.32□□□□□ -1.08
PPP4R1-216ENST00000580283 SH3TC1Q8TE82 1336 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 SREBF2Q12772 1141 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 PRKG1Q13976 671 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 COPS6Q7L5N1 327 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 ZNF655Q8N720 491 aaPredicted RBP8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 FAM89AQ96GI7 184 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 SEC16BQ96JE7 1060 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 ZNF333Q96JL9 665 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 PTPN18Q99952 460 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms